Table 1 Characteristics of the novel STR marker system.

From: Genome-wide screening of microsatellites in golden snub-nosed monkey (Rhinopithecus roxellana), for the development of a standardized genetic marker system

Locus

Motif

Primer pair (5′-3′)

Size (bp)

Location

GSM03

CAAA

F: TTCTCCTTCTCTGACACATC

R: TACTGCCAAGTTAGAGTGAG

154–166

Non-coding region

GSM04

CAAA

F: TTGCAGTGAGCCAGGATAGC

R: TTACCTATGAGTGCCAGGCC

171–187

Intron

GSM05

CTTT

F: TAACTCACTGGAGCAGAGA

R: GCAGTAAGCCAAGATCGT

145–149

Intron

GSM07

TAAA

F: ATGATCACACCACTGCACCC

R: TTCTTCAAGGCTGTGTCCCC

140–152

Non-coding region

GSM13

ATAC

F: CTGGGCGATAGAATGAGACCC

R: GGTCCATGGCTCTTAAGGGG

125–137

Intron

GSM16

TAGA

F: TTATCGATGGCTCAGCTGGC

R: ACAAATGGGTGTTTGGGTGG

190–194

Non-coding region

GSM18

CAAA

F: AGCGGGAGAATCACTTGAGC

R: TGTTTTTGGTTTGGGGGTTTGG

160–188

Intron

GSM21

CAAA

F: GCAGGTGGAATGCTTGAACC

R: GCATCTTGCATCTGCTGAGC

131–155

Non-coding region

GSM25

GAAT

F: TGCTTCTAGTGTTTTGCAGTGC

R: GCTGGGCATTAGTGGAGAGG

129–137

Non-coding region

GSM31

TTTA

F: ATGGTTGAGCAAGCCCAGG

R: TGATCCCAGAGGTTTGAGGC

157–165

Intron

GSM32

ATTT

F: GGTCTGCTTGTTGAATATGGAGC

R: CACACCACTACACTCCAGCC

168–188

Intron

GSM42

ATGA

F: GAAACCAAACTGCCCACACC

R: CACAAAACACCACAGACCGG

108–128

Intron

GSM47

TAGA

F: TCTAGCCTCCAGAACCAT

R: CCTATGTATCTATCTGCCTATC

155–175

Intron

GSM51

CAAA

F: ATCTGGACTGCTTATTCTGT

R: AGGAAGGCTTCATACTCAAG

120–128

Non-coding region

GSM69

TCTT

F: GAGCTAAGTTGTATATTCTGGCTCC

R: CACACCACTGTACTCCAGCC

134–154

Non-coding region

GSM75

TACA

F: AGATGAGATGGTGCCAATG

R: GCCATGCAGGTTGTAGATA

114–130

Non-coding region

ZFX-ZFY

 

F: TTATGGTGAAAGCCAAGAA

R: GCAATTTCAGCAACATCTAAG

X-211

Y-140