Table 2 Amino acid sequences and substitutions in H5 low pathogenic avian influenza viruses (LPAIVs) isolated from wild birds in South Korea between 2010 and 2017.

From: Genetic characteristics and pathogenesis of H5 low pathogenic avian influenza viruses from wild birds and domestic ducks in South Korea

Virus name

HAa

M1

NS1

PB2

PB1-F2

PA

Cleavage site

T156A

Q222L

G224S

V15I

P42S

L89V

G309D

T339K

R477G

I495V

E627K

A676T

D701N

N66S

S409N

K615R

A40-1/12

PQRETR↓GLF

A

Q

G

V

A

V

D

K

G

V

E

T

D

S

S

K

H598/14

PQRETR↓GLF

A

Q

G

V

S

V

D

K

G

V

E

T

D

S

S

K

H1862/14

PQRETR↓GLF

A

Q

G

V

S

V

D

K

G

V

E

T

D

N

S

K

H2016/14

PQRETR↓GLF

A

Q

G

V

S

V

D

K

G

V

E

T

D

N

S

K

H2193/15

PQRETR↓GLF

A

Q

G

V

S

V

D

K

G

V

E

T

D

N

S

K

H2262/15

PQRETR↓GLF

A

Q

G

V

S

V

D

K

G

V

E

T

D

N

S

K

H2512/15

PQRETR↓GLF

A

Q

G

I

S

V

D

K

G

V

E

A

D

N

S

K

H3328/15

PQRETR↓GLF

A

Q

G

V

S

V

D

K

G

V

E

T

D

N

S

K

H3373/15

PQRETR↓GLF

A

Q

G

V

S

V

D

K

G

V

E

T

D

N

S

K

H2292/15

PQRETR↓GLF

A

Q

G

V

S

V

D

K

G

V

E

T

D

N

S

K

H2318/15

PQRETR↓GLF

A

Q

G

V

S

V

D

K

G

V

E

T

D

N

S

K

H3135/15

PQRETR↓GLF

A

Q

G

V

S

V

D

K

G

V

E

T

D

N

S

K

H3173/15

PQRETR↓GLF

A

Q

G

V

S

V

D

K

G

V

E

T

D

N

S

K

H3306/15

PQRETR↓GLF

A

Q

G

V

A

V

D

K

G

V

E

T

D

N

S

K

H3316/15

PQRETR↓GLF

A

Q

G

V

S

V

D

K

G

V

E

T

D

N

S

K

H3334/15

PQRETR↓GLF

A

Q

G

V

S

V

D

K

G

V

E

T

D

N

S

K

H3422/15

PQRETR↓GLF

A

Q

G

V

S

V

D

K

G

V

E

T

D

N

S

K

H3473/15

PQRETR↓GLF

A

Q

G

V

S

V

D

K

G

V

E

T

D

N

S

K

H50/16

PQRETR↓GLF

A

Q

G

V

S

V

D

K

G

V

E

T

D

N

S

K

H95-4/16

PQRETR↓GLF

A

Q

G

V

S

V

D

K

G

V

E

T

D

N

S

K

H96-1/16

PQRETR↓GLF

A

Q

G

V

S

V

D

K

G

V

E

T

D

N

S

K

H125-4/16

PQRETR↓GLF

A

Q

G

V

S

V

D

K

G

V

E

T

D

N

S

K

H886/16

PQRETR↓GLF

A

Q

G

V

S

V

D

K

G

V

E

T

D

N

S

K

H1069-3/17

PQRETR↓GLF

A

Q

G

V

S

V

D

K

G

V

E

T

D

N

S

K

H189-1/16

PQRETR↓GLF

A

Q

G

V

S

V

D

K

G

V

E

T

D

N

S

K

A44-1-3/16

PQRETR↓GLF

A

Q

G

V

S

V

D

K

G

V

E

T

D

S

S

K

H604-1/16

PQRETR↓GLF

A

Q

G

V

S

V

D

K

G

V

E

T

D

N

S

K

H1029-2/17

PQRETR↓GLF

A

Q

G

V

S

V

D

K

G

V

E

T

D

N

S

K

H422-7/16

PQRETR↓GLF

A

Q

G

V

A

V

D

K

G

V

E

T

D

S

S

R

A11-4/17

PQRETR↓GLF

A

Q

G

V

S

V

D

K

G

V

E

T

D

S

S

K

A14-2/17

PQRETR↓GLF

A

Q

G

V

S

V

D

K

G

V

E

T

D

S

S

K

H15-1/17

PQRETR↓GLF

A

Q

G

V

S

V

D

K

G

V

E

T

D

N

S

K

A09-1-2/17

PQRETR↓GLF

A

Q

G

V

A

V

D

K

G

V

E

T

D

N

S

K

A44-5/17

PQRETR↓GLF

A

Q

G

V

S

V

D

K

G

V

E

T

D

S

S

K

A33-5/17

PQRETR↓GLF

A

Q

G

V

A

V

D

K

G

V

E

T

D

N

N

K

H10-1/17

PQRETR↓GLF

A

Q

G

V

A

V

D

K

G

V

E

T

D

N

N

K

H55/17

PQRETR↓GLF

A

Q

G

V

S

V

D

K

G

V

E

T

D

N

S

K

H57-2/17

PQRETR↓GLF

A

Q

G

I

S

V

D

K

G

A

E

T

D

N

S

K

H1105-3/17

PQRETR↓GLF

A

Q

G

V

S

V

D

K

G

V

E

T

D

S

S

K

A32-3/17

PQRETR↓GLF

A

Q

G

V

A

V

D

K

G

V

E

T

D

N

S

K

A45-1/17

PQRETR↓GLF

A

Q

G

V

A

V

D

K

G

V

E

T

D

N

S

K

A46-1-4/17

PQRETR↓GLF

A

Q

G

V

A

V

D

K

G

V

E

T

D

N

S

K

A42-4/17

PQRETR↓GLF

A

Q

G

V

S

V

D

K

G

V

E

T

D

N

S

K

H51/17

PQRETR↓GLF

A

Q

G

V

S

V

D

K

G

V

E

T

N

N

S

K

A21-2/17

PQRETR↓GLF

A

Q

G

V

S

V

D

K

G

V

E

T

D

N

S

K

H33/17

PQRETR↓GLF

A

Q

G

V

A

V

D

K

G

V

E

T

D

S

S

K

H49/17

PQRETR↓GLF

A

Q

G

V

S

V

D

K

G

V

E

I

D

N

S

K

H112/17

PQRETR↓GLF

A

Q

G

V

A

V

D

K

G

V

E

T

D

N

S

K

  1. aH5 numbering was used. HA, hemagglutinin; M, matrix; NS, nonstructural; PB, polymerase basic; PA, polymerase acidic.
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