Table 2 The amino acid comparison of the avian parvoviruses and picornaviruses from the Australian duck samples.
From: Metagenomic characterisation of avian parvoviruses and picornaviruses from Australian wild ducks
Virus | NCBI Accession number | Protein | Percentage similarity to its nearest relative |
|---|---|---|
Parvovirus | ||
PBDAAV/PBD12.16 | MT247729 | NS1 | (KX583629) Muscovy duck AAV28: 82.5% |
PBDAPaV/N1106/1233nt/PBD08.18 | MT247755 | Partial NS1 | (KC876004) Pigeon APaV33: 67.7% |
PBDCPaV1/PBD12.16 | MT247730 | NS1 | (MT247765) CTCPaV/N39/N40/2864nt/CT08.18/12952: 82.2% |
CTCPaV1/CT08.18 | MT247758 | NS1 | (MG846442 and MG846443) Chicken CPaV: 69.6% |
CTCPaV2/CT08.18/12952 | MT247759 | NS1 | (MT247758) CTCPaV1/CT08.18: 57.1% |
CTCPaV3/CT08.18 /12952 | MT247760 | NS1 | (MT247758) CTCPaV1/CT08.18: 60.4% |
CTCPaV/N39/N40/2864nt/CT08.18/12952 | MT247765 | NS1 | (MT247730) PBDCPaV1/PBD12.16: 81.9% |
Picornaviruses | ||
PBDAaV/7615nt/PBD08.18 | MT247844 | RdRp, Peptidase C3, Helicase and capsid | (KJ000696) Duck Aalivirus A: 82.8% |
PBDAaV/4182nt/PBD05.18 | MT247842 | RdRp, Peptidase C3 and Helicase | (KJ000696) Duck Aalivirus A: 98.8% |
CTAaV/N55/2515nt/CT05.18 | MT247835 | RdRp, Peptidase C3 and Helicase | (KJ000696) Duck Aalivirus A: 65.5% |
PBDSV-like virus/4792nt/PBD05.18 | MT247840 | RdRp, Peptidase C3 and Helicase | (KF979331) Chicken picornavirus 1: 61.4% |
PBDAnV-like virus/5691nt/PBD08.18 | MT247843 | RdRp, Peptidase C3, Helicase, 2B and capsid | (AY563023) Duck Anativirus A: 52.8% |
PBDMeV/2821nt/PBD08.18 | MT247849 | RdRp and Peptidase C3 | (MK204391) Duck megrivirus: 99.2% |
WDMeV/N9/2933nt/WD08.18 | MT247851 | RdRp and Peptidase C3 | (MT247854) WDMeV/4874nt/WD08.18: 99.5% |
WDMeV/N87/2221nt/WD08.18 | MT247852 | RdRp and Peptidase C3 | (MT247854) WDMeV/4874nt/WD08.18: 96.8% |
WDMeV/N12/4874nt/WD08.18 | MT247854 | RdRp, Peptidase C3 and Helicase | (MT247851) WDMeV/2933nt/WD08.18: 99.7% |
