Table 1 Primers used for PCR.
From: A double-Flp-in method for stable overexpression of two genes
Primers used for generation of pcDNA5/FRTpuro vector | |||
---|---|---|---|
Fragment | Primer | Sequene (5′–3′) | Amplicon size (bp) |
pcDNA5 backbone | PuroR_p5_fwd | cacgaccccatgGGCTGGATGATCCTCCAGCG | 3,834 |
SV40/FRT_p5_rev | gacacgtacgtacgtGGCGAACGTGGCGAGAAAGG | ||
Puromycin resistance | SV40/FRT_PuroR_fwd | ttccttggccACCGAGTACAAGCCCACGG | 669 |
p5_PuroR_rev | tcatccagccCATGGGGTCGTGCGCTCC | ||
SV40 promotor-FRT region | p5_SV40/FRT_fwd | gccacgtacgtacgtGTCAGTTAGGGTGTGGAAAG | 395 |
PuroR_SV40/FRT_rev | tcggtggccaagGAAGTTCCTATACTTTCTAGAG |
Primers used for site-directed mutagenesis | |||
---|---|---|---|
Vector | Primer | Sequence (5′–3′) | Amplicon size (bp) |
pcDNA5/FRThygro | SDM_hygro_fwd | GTATAGGAACTTCCTTGGC-AAAAAGCCTGAACTCACC | N/A |
SDM_hygro_rev | GGTGAGTTCAGGCTTTTT-GCCAAGGAAGTTCCTATAC | ||
pcDNA5/FRTpuro | SDM_puro_fwd | CATGGCAGAAGTTCCTATTCCGAAGTTCC | N/A |
SDM_puro_rev | AATAGGAACTTCTGCCATGGTAGCCTCC |
Primers used for cloning of CYP2C19 | |||
---|---|---|---|
Reaction | Primer | Sequence (5′–3′) | Amplicon size (bp) |
Reverse transcription | CYP2C19_GSP_rev | GAGGAAAGAGAGCTGCAGGG | N/A |
Introduction of restriction sites | CYP2C19_HindIII_fwd | AAGAGGAGaagcttACCATGGATCCTTTTGTGGTCCTTG | 1516 |
CYP2C19_EcoRV_rev | CATCTGTgatatcTCAGACAGGAATGAAGCACAGC |
Primers used for Validation PCRs | |||
---|---|---|---|
Reaction | Primer | Sequence (5′–3′) | Amplicon size (bp) |
Integration PCR 1 | PSV40 | AGCTGTGGAATGTGTGTCAGTTAGG | 559 |
Ppuro_r | CGACGCGCGTGAGGAAGAGTTCTTG | ||
Integration PCR 2 | Puni_f | CGTTCGCCACGTACGTACGTGTCAG | 489 |
Phyr_r | CTTCGCCCTCCGAGAGCTGCATCAG | ||
Multiple Integration PCR A | Puni_f | CGTTCGCCACGTACGTACGTGTCAG | 564 |
Ppuro_r | CGACGCGCGTGAGGAAGAGTTCTTG | ||
Multiple Integration PCR B | PFRT_f | AATCGGGGGCTCCCTTTAGGGTTCC | 313 |
Ppuro_r | CGACGCGCGTGAGGAAGAGTTCTTG | ||
Multiple Integration PCR C | PFRT_f | AATCGGGGGCTCCCTTTAGGGTTCC | 238 |
Phyr_r | CTTCGCCCTCCGAGAGCTGCATCAG |
Primers used for quantitative RT-PCR | |||
---|---|---|---|
Gene | Primer | Sequence (5′-3′) | Amplicon size (bp) |
CYP2C19 | PCYP2C19_f | CCTGATCAAAATGGAGAAGGAAAAG | 99 |
PCYP2C19_r | TCTGTCCCAGCTCCAAGTAAG | ||
HPRT1 | PHPRT1_f | TGACACTGGCAAAACAATGCA | 94 |
PHPRT1_r | GGTCCTTTTCACCAGCAAGCT | ||
OCT1 | POCT1_f | TGTCACCGAAAAGCTGAGCC | 96 |
POCT1_r | TCCGTGAACCACAGGTACATC |