Table 7 Association of the haplotype of HOTAIR/HOTTIP gene with GC risk were calculated using the SNPStats.

From: SNP-SNP interactions of oncogenic long non-coding RNAs HOTAIR and HOTTIP on gastric cancer susceptibility

HOTAIR

rs17720428

rs7958904

rs1899663

rs4759314

Frequency in control group

Frequency in patients group

OR (95%CI)

p-value

 

T

G

G

A

0.5948

0.5281

1

-

 

G

C

T

A

0.3432

0.4

1.31 (1.03—1.67)

0.029

 

T

C

G

A

0.0453

0.0469

1.16 (0.67—2.01)

0.61

 

T

C

G

G

0.0149

0.0233

1.72 (0.73—4.08)

0.22

 

G

C

T

G

0.0018

–

–

–

 

G

C

G

A

-

0.0017

–

–

HOTTIP

rs3807598

rs17501292

rs1859168

–

    
 

G

T

C

–

0.4843

0.4696

1

-

 

C

T

C

–

0.3181

0.3121

1.01 (0.78—1.31)

0.93

 

C

G

C

–

0.1326

0.1676

1.28 (0.92—1.77)

0.14

 

C

T

A

–

0.0571

0.0444

0.77 (0.45—1.32)

0.34

 

C

G

A

–

0.0079

0.004

0.90 (0.16—4.94)

0.9

 

G

G

C

–

–

0.0024

–

–

  1. https://www.snpstats.net/start.htm based on the expectation maximization algorithm.
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