Table 2 List of genes related to cell process, disease, and functional class altered by DEP exposure.

From: Genomic approach to explore altered signaling networks of olfaction in response to diesel exhaust particles in mice

Entity

Type

Relation

Gene

Actin organization

Cell process

Regulation

DPYSL5, EPHA5, ERMN, ESR2, GJA1, IL1B, IL6, MAP1B, MEF2A, ROBO2

Apoptosis

Cell process

Regulation

ANKK1, CYP26B1, DCT, ESR2, GFRA4, GJA1, IFIT1, IL1B, IL6, MAP1B, MEF2A, ROBO2, THBS4

Axon guidance

Cell process

Regulation

CDH, DPYSL5, EPHA5, ESR2, MAP1B, ROBO2, SEMA4C

Axonogenesis

Cell process

Regulation

CDH4, DPYSL5, EPHA5, IL6, MAP1B, MEF2A, ROBO2

Immune response

Cell process

Regulation

DCT, DPYSL5, ESR2, GJA1, IFIT1, IL1B, IL6, KCNA4, MEF2A, ROBO2

Inflammatory response

Cell process

Regulation

ESR2, GJA1, IL1B, IL6, MEF2A, THBS4

Nervous system development

Cell process

Regulation

CDH4, DPYSL5, EPHA5, ESR2, GJA1, IL1B, IL6, MAP1B, MEF2A, ROBO2, SEMA4C, SLC1A4, SYNPR, THBS4, TSKU

Neurite outgrowth

Cell process

Regulation

CDH4, DPYSL5, ESR2, GFRA4, GJA1, IL1B, IL6, MAP1B, MEF2A, ROBO2, THBS4, TSKU

Neurogenesis

Cell process

Regulation

CYP26B1, DPYSL5, EPHA5, ESR2, GJA1, MAP1B, MEF2A, ROBO2

Neuronal plasticity

Cell process

Regulation

EPHA5, ESR2, GJA1, IL1B, IL6, MAP1B, MEF2A, THBS4

Olfaction

Cell process

Regulation

CNGB1, ESR2

Oxidative stress

Cell process

Regulation

DCT, ESR2, GJA1, IL1B, IL6, MEF2A

ROS generation

Cell process

Regulation

ESR2, GJA1, IL1B, IL6, MEF2A

Sensory perception

Cell process

Regulation

ESR2, GJA1, IL6

Synaptic transmission

Cell process

Regulation

ESR2, GJA1, IL1B, IL6, KCNA4, MAP1B, MEF2A, SHANK1, SYNPR, THBS4

Synaptogenesis

Cell process

Regulation

EPHA5, ESR2, GJA1, IL1B, IL6, MAP1B, MEF2A, ROBO2, SHANK1, SYNPR, THBS4

Inflammation

Disease

Regulation

ESR2, GJA1, IL1B, IL6, THBS4

Neurodegeneration

Disease

Regulation

ESR2, IL1B, IL6, MAP1B

Olfaction disorder

Disease

Genetic change

CNGB1

Quantitative change

CNGB1

Regulation

CNGB1

Olfactory receptor

Functional class

Expression

CYP26B1, DPYSL5, EPHA5, ESR2, GJA1, MAP1B, MEF2A, ROBO2

Promoter binding

MEF2A