Figure 4 | Scientific Reports

Figure 4

From: FluoSim: simulator of single molecule dynamics for fluorescence live-cell and super-resolution imaging of membrane proteins

Figure 4

Fitting FRAP experiments. (a) Representative images of COS-7 cells expressing GFP-Nrx1β either not forming contact (left), or forming contact with another cell expressing Nlg1-mCherry (right). (b) Corresponding FRAP sequences on the zoomed square areas (bleached circle diameter = 2.8 µm). Intensity is color coded. (c,d) Simulated images of the same cell geometries filled with 150,000 fluorescent molecules, and corresponding FRAP sequences. (e) Normalized FRAP curves obtained by experiment (closed circles) outside (mean ± sem of 6 cells, 44 bleached regions) or inside contact regions (mean ± sem of 18 cells, 144 bleached regions) and corresponding simulations (solid curves, average of 30 repetitions each, sem < 1% mean, not shown). The Spearman correlation coefficient comparing experiment and simulation was r = 1.0 (P < 0.001, n = 21 time points) for contact regions, and r = 0.98 (P < 0.001, n = 43 time points) for outside regions.

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