Figure 5
From: Systematic comparison and assessment of RNA-seq procedures for gene expression quantitative analysis
Differential expression detection. Number of differentially expressed genes (DEGs) detected by the 17 methods of differential expression at three FDR cut-offs: 0.05, 0.01 and 0.001. Panels represent different group comparisons in descending order based on the number of DEGs. (a) KMS12-BM (CLA) + DMSO (T0) vs. JJN-3 (CLB) + DMSO (T0) (b) KMS12-BM (CLA) + Amiloride (T1) vs. KMS12-BM (CLA) + DMSO (T0) (c) KMS12-BM (CLA) + TG003 (T2) vs. KMS12-BM (CLA) + DMSO (T0) (d) JJN-3 (CLB) + Amiloride (T1) vs. JJN-3 (CLB) + DMSO (T0) (e) JJN-3 (CLB) + TG003 (T2) vs. JJN-3 (CLB) + DMSO (T0).
