Figure 3

For every transcript, the fold change between bacteria growing in liquid Wilbrink’s medium and in planta 15 days after inoculation is plotted against the p value. Statistically significant differentially expressed genes (DEGs) with a log₂ fold change ≥ 1.5 or ≤  − 1.5 are depicted as red dots, insignificant as blue dots. The numbers aside the arrow pointing up represent the number of upregulated genes and the numbers aside arrow pointing down represent the number of downregulated genes in planta.