Table 3 SSR distribution.

From: Development of whole-genome multiplex assays and construction of an integrated genetic map using SSR markers in Senegalese sole

High density SNP map

SSR markers

Cynoglossus Chromosomes

LD genetic map

This study

LD genetic map

Total

SseLG01

11

3

14

chr3,chr20

LG21,LG27

SseLG02

6

6

12

chr14,chr16

LG17,LG18,LG25

SseLG03

5

5

10

chr1, chr8, chrZ

LG7

SseLG04

4

8

12

chr11, chrZ

LG2

SseLG05

8

7

15

chrZ

LG4

SseLG06

7

10

17

chr9

LG1

SseLG07

4

15

19

chr5

LG3,LG26

SseLG08

5

4

9

chr4

LG22,LG24

SseLG09

5

5

10

chr13

LG16,LG20

SseLG10

4

6

10

chr6

LG6

SseLG11

3

5

8

chr10

LG10

SseLG12

6

8

14

chr15

LG13,LG23

SseLG13

4

0

4

chr19

SseLG14

4

8

12

chr2

LG8

SseLG15

5

4

9

chr12

LG12

SseLG16

4

5

9

chr1

LG15

SseLG17

4

6

10

chr7

LG11

SseLG18

5

2

7

chr8

LG19

SseLG19

4

7

11

chr17

LG1,LG14

SseLG20

4

3

7

chr18

LG5

SseLG21

3

4

7

chr14

LG9

Unplaced

3

5

8

 

Total

108

126

234

  
  1. Markers are groups by the 21 linkage groups (SseLG) of the high-density SNP genetic map. The number of SSRs of this study and those from Low-density (LD) genetic linkage map (Molina-Luzon et al., 2015) are indicated. The location of markers in C. semilaevis genome by blasting the scaffold containing the SSR marker and the LG in the LD genetic map are indicated.