Table 1 Characteristics of major tick secretory protein family expression in the Rhipicephalus evertsi evertsi transcriptome.
Secreted protein family | Average TPM of protein family | Number of family members | Proportion of the total number of secretory proteins represented by this family (%) | Proportion of the secretory protein class expression represented by this family (%) | ID of the top expressing member in the family | TPM value of the top expressing member in the family | Proportion of the protein family represented by the top expressing member (%) |
---|---|---|---|---|---|---|---|
24Â kDa | 41.82 | 20 | 0.98 | 0.53 | Reve_36790 | 138.42 | 16.55 |
28kDa_metastriate | 155.61 | 8 | 0.39 | 0.78 | Reve_9246 | 683.13 | 54.88 |
5NT | 12.66 | 26 | 1.27 | 0.21 | Reve_53772 | 126.37 | 38.40 |
7DB | 4.60 | 5 | 0.25 | 0.01 | Reve_5751 | 7.11 | 30.94 |
AG5 | 53.36 | 19 | 0.93 | 0.64 | Reve_406 | 299.12 | 29.50 |
BPTI | 22.74 | 306 | 15.00 | 4.37 | Reve_16283 | 490.75 | 7.05 |
BPTI_lipocalin | 3.59 | 1 | 0.05 | 0.00 | Reve_50393 | 3.59 | 100.00 |
BTSP | 43.25 | 72 | 3.53 | 1.96 | Reve_34913 | 354 | 11.37 |
Cement | 513.07 | 177 | 8.68 | 57.09 | Reve_54513 | 13,233.53 | 14.57 |
Cys-richD2 | 4.74 | 1 | 0.05 | 0.00 | Reve_14221 | 4.74 | 100.00 |
Cystatin | 14.91 | 8 | 0.39 | 0.07 | Reve_29872 | 78.52 | 65.83 |
Defensin | 17.73 | 30 | 1.47 | 0.33 | Reve_63270 | 89.29 | 16.79 |
EF-hand/Longistatin | 40.81 | 1 | 0.05 | 0.03 | Reve_37845 | 40.81 | 100.00 |
ETX_MTX2 | 16.75 | 15 | 0.74 | 0.16 | Reve_40855 | 83.26 | 33.14 |
Evasin | 18.76 | 85 | 4.17 | 1.00 | Reve_41657 | 448.52 | 28.12 |
FreD | 23.01 | 10 | 0.49 | 0.14 | Reve_11395 | 45.42 | 19.74 |
Gluzincin | 6.14 | 73 | 3.58 | 0.28 | Reve_4761 | 48.74 | 10.87 |
Hirudin | 270.86 | 4 | 0.20 | 0.68 | Reve_50959 | 418.08 | 38.59 |
IGBPA | 1014.99 | 8 | 0.39 | 5.10 | Reve_38932 | 3153.12 | 38.83 |
Ix26kDa | 5.15 | 3 | 0.15 | 0.01 | Reve_46771 | 6.04 | 39.09 |
Ix8.9Â kDa | 25.26 | 132 | 6.47 | 2.10 | Reve_16140 | 427.27 | 12.81 |
IxodegrinB | 9.35 | 119 | 5.83 | 0.70 | Reve_13333 | 147.83 | 13.29 |
Kazal | 18.60 | 5 | 0.25 | 0.06 | Reve_26944 | 70.44 | 75.75 |
Kazal/SPARC | 18.16 | 2 | 0.10 | 0.02 | Reve_53837 | 21.02 | 57.89 |
Kazal/vWf | 13.30 | 4 | 0.20 | 0.03 | Reve_58653 | 40.02 | 75.24 |
Lipocalin | 76.20 | 235 | 11.52 | 11.26 | Reve_17348 | 3439.33 | 19.21 |
Longistatin | 30.90 | 1 | 0.05 | 0.02 | Reve_56956 | 30.9 | 100.00 |
Metalloprotease | 5.92 | 15 | 0.74 | 0.06 | Reve_32715 | 34.15 | 38.48 |
ML_domain | 349.40 | 12 | 0.59 | 2.64 | Reve_19418 | 4106.88 | 97.95 |
Mucin | 12.38 | 154 | 7.55 | 1.20 | Reve_26068 | 441.03 | 23.13 |
Reprolysin | 15.39 | 214 | 10.49 | 2.07 | Reve_62060 | 243.17 | 7.38 |
SALP15 | 3.55 | 2 | 0.10 | 0.00 | Reve_10966 | 3.87 | 54.51 |
Serpin | 2.94 | 32 | 1.57 | 0.06 | Reve_60207 | 11.99 | 12.76 |
Sphingomyelinase | 3.48 | 14 | 0.69 | 0.03 | Reve_9137 | 12.18 | 25.01 |
Unknown sec protein | 43.08 | 7 | 0.34 | 0.19 | Reve_42700 | 205.79 | 68.24 |
TCI | 15.17 | 15 | 0.74 | 0.14 | Reve_19551 | 105.84 | 46.52 |
Thyropin | 4.98 | 8 | 0.39 | 0.03 | Reve_37339 | 10.66 | 26.78 |
TIL | 48.35 | 197 | 9.66 | 5.99 | Reve_24953 | 1551.15 | 16.28 |
Grand total | 77.98 | 2040 | 100.00 | 100.00 | Â | Â | Â |