Table 2 Polymorphic markers used to genotype native populations of S. terebinthifolia. Microsatellite loci, primer sequences (5′–3′), annealing temperature (°C), number of alleles (NA) and accession numbers.

From: Genetic and chemodiversity in native populations of Schinus terebinthifolia Raddi along the Brazilian Atlantic forest

Multiplex

Locus

Primer sequences 5′–3′

T (°C)

NA

Genbank accession nº

M1

StAAT25a

ATTTGGAAAATAATAATAATAATA

50°

6

AF404285.1

CGTGCAGAACTTCAATTTTGATTG

StAAT55a

AAGGGGTTAAAAAATAATCAAACT

50°

10

AF404289.1

TAATAACTATGTTAGGTTAGATAG

M2

StAAT16b

AACAGCCCACCATTTTAACAA

50°

7

AF404282.1

TGGGTAGGTGATGCAGTTCTA

StAAT47b

CCTCTTAAGGAACTTTTTATTATT

50°

4

AF404287.1

TTGCTTTTCATTTGTTTATCTTAC

M3

StAAT17a

TTGGGTTAAATTGGTAGGTGTAAT

50°

7

AF404283.1

AGGGGAAATGAAATCATCCTTATT

StAAT9b

ATTTGGTGAATAGGAGATGTTTTA

50°

7

AF404280.1

ATTGAAATGTTTGGTTCATAGATA

StAAT1a

AAGGGTGAGAATCTGAAATTTA

50°

12

AF404279.1

GGCAAACCCATTAGTGAGTTTA

  1. aPrimers redesigned based on total sequences published on Genbank databases, adapted from Williams et al.30.
  2. bPrimers designed according to Williams et al.30.