Table 2 Observed SNPs and their characteristics in flanking regions of STRs in the current study.

From: Sequence variations, flanking region mutations, and allele frequency at 31 autosomal STRs in the central Indian population by next generation sequencing (NGS)

SNPs

Chromosomal position

Most frequent allele

Least frequent allele

Frequency of least frequent allele

STR marker

Upstream/downstream

rs9546005

13q

A

T

0.196

D13S317

Downstream

rs73250432

13q

C

T

0.002

Upstream

rs25768

5q

A

G

0.265

D5S818

Upstream

rs369257353

5q

A

C

0.002

Downstream

rs16887642

7q

G

A

0.075

D7S820

Downstream

rs146350460

14q

C

T

0.004

D14S1434

Upstream

rs11642858

16q

A

C

0.122

D16S539

Downstream

rs4847015

1q

C

T

0.047

D1S1656

Downstream

rs62357468

5q

G

C

0.079

D5S2800

Upstream

rs12187142

5q

C

T

0.078

Downstream

rs74640515

2p

G

A

0.028

D2S441

Upstream

rs75219269

12p

A

G

0.049

vWA

Upstream

rs563997442

16q

C

G

0.029

D16S539

Upstream

rs561924992

16q

A

T

0.002

Downstream

rs62414880

6q

A

G

0.016

D6S474

Upstream

rs191784375

2q

C

T

0.004

D2S1776

Downstream

rs531980552

10q

C

T

0.002

D10S1248

Downstream

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