Table 2 The genes found in 50 kbp distances from the detected significant SNPs in GWAS, based on BioMart tool of Ensembl database (www.ensembl.org).

From: Genome-wide association study and genomic heritabilities for blood protein levels in Lori-Bakhtiari sheep

SNP

Chr

Location (bp)

Gene

Strand

Gene start (bp)

Gene end (bp)

Distance

rs411530530

3

181680527

PKP2

F

181710282

181800739

− 29755

rs401001039

4

107694115

–

F

–

–

–

rs429230884

7

86283700

ENSOARG00000017510

F

86330934

86331638

− 47234

rs427910139

8

82987574

IGF2R

F

82874886

82959397

28177

SLC22A1

F

82967383

83002611

Within

SLC22A2

R

83028720

83060568

− 41146

  1. PKP2: Plakophilin 2; IGF2R: Insulin like growth factor 2 receptor; SLC22A1: Solute carrier family 22 member 1; SLC22A2: Solute carrier family 22 member 2; F and R: forward and reverse strands, respectively; Negative and positive distances indicate the SNPs before and after the genes, respectively.
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