Figure 4
From: An atypical class of non-coding small RNAs is produced in rice leaves upon bacterial infection
Multiple xisRNA loci cis-gene products with kinase domains are related to immune signaling pathways components in rice or Arabidopsis. The displayed phylogenetic trees correspond to selected sub-clades of proteins belonging to the RLCK-VIIa-2 (A), RLCK-VIIa-1 (B) and DLSV (C) subfamilies in the genome-wide phylogenetic tree (Supplementary File S1) constructed using the kinase domain of annotated proteins in the Arabidopsis Col-0 and Rice Nipponbare genomes. Dotted lines connect plant protein names with xisRNA identifiers when the xisRNA duplex loci is fully included in an exon of the underlying gene. Shaded rectangles highlight clades that are discussed in the text. The FastTree support value grey scale for tree nodes corresponds to local bootstrappings used by FastTree to estimate the tree's reliability. Scale bars correspond to substitutions per site.
