Figure 5

Representative example of the HNF1B splicing pattern based on the capture RNA-Seq of a kidney T sample visualised as a sashimi plot in IGV (Broad Institute). The height of the peaks shows exon coverage, the red lines show splicing reads, the red numbers in the red lines show the number of splicing reads, the ASVs are indicated in blue font and the number of ASVs’ reads is circled. The dark blue scheme under the plot shows the gene structure of the protein coding HNF1B transcripts (blue boxes indicate exons; thin horizontal lines indicate introns). The cut-off for visualisation of the splicing reads was set to 10. The results are provided in Table 3.