Table 1 Differentially methylated genes (FDR cutoff of p < 0.05 and Δβ > 0.2) in chorionic villi of miscarriages with trisomy 16.
From: Identification of differentially methylated genes in first-trimester placentas with trisomy 16
Symbol | RefSeq | Product | CpG-island | Δβ | Chr |
|---|---|---|---|---|---|
ZNF804B | NM_181646.2 | Zinc-finger protein 804B | True | 0.279 | 7 |
ANKRD53 | NM_024933.2 | Ankyrin repeat domain-containing protein 53 | True | −0.275 | 2 |
TRPV6 | NM_018646.2 | Transient receptor potential cation channel; subfamily V; member 6 | False | −0.268 | 7 |
SEC31L2 | NM_015490.3 | S. cerevisiae SEC31-like 2 isoform a | True | −0.258 | 10 |
CCL2 | NM_002982.3 | Small inducible cytokine A2 precursor | False | −0.233 | 17 |
GATA3-AS1 | NM_207423.1 | GATA3 antisense RNA 1 | True | −0.226 | 10 |
SLC13A4 | NM_012450.2 | Solute carrier family 13 (sodium/sulfate symporters); member 4 | False | −0.223 | 7 |
SLC17A4 | NM_005495.1 | Solute carrier family 17 (sodium phosphate); member 4 | False | −0.221 | 6 |
CYSLTR2 | NM_020377.2 | Cysteinyl leukotriene receptor 2 | False | −0.219 | 13 |
ZNF683 | NM_173574.1 | Zinc-finger protein 683 | False | −0.216 | 1 |
CALCB | NM_000728.3 | Calcitonin-related polypeptide; beta | True | −0.215 | 11 |
PDZD3 | NM_024791.2 | Sodium-phosphate cotransporter IIa C-terminal-associated protein 2 | False | −0.214 | 11 |
CCR8 | NM_005201.2 | Chemokine (C–C motif) receptor 8 | False | −0.210 | 3 |
FANCG | NM_004629.1 | Fanconi anemia; complementation group G | True | −0.209 | 9 |
KRTAP10-8 | NM_198695.1 | Keratin-associated protein 10–8 | False | −0.204 | 21 |
BRS3 | NM_001727.1 | Bombesin-like receptor 3 | False | −0.203 | X |
CCL21 | NM_002989.2 | Small inducible cytokine A21 precursor | False | −0.202 | 9 |
SLC3A1 | NM_000341.2 | Solute carrier family 3; member 1 | False | −0.201 | 2 |
