Table 2 Sequence alignment statistics of the four transcriptome libraries in inoculated Ae. tauschii accessions with P. triticina pathotype CDHLQ and mock-inoculated ones at the seedling stage with the reference genome (GCA_002575655.1–v.4 from Ensembl).

From: Comparative transcriptome analysis of two contrasting resistant and susceptible Aegilops tauschii accessions to wheat leaf rust (Puccinia triticina) using RNA-sequencing

Library name

RC

RT

SC

ST

Number of HQ clean reads uniquely mapped (×106)

55.31

54.89

62.50

44.87

Uniquely mapped reads (%)

96.16

96.06

96.19

96.54

Multiple mapped reads (%)

1.93

1.97

2.02

2.15

Unmapped reads (%)

1.88

1.96

1.79

1.31

Chimeric reads (%)

0.00

0.00

0.00

0.00

  1. RC resistant control, RT resistant treatment, SC susceptible control, ST susceptible treatment.
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