Table 2 Graph theory metrics.
From: Cortical morphology predicts placebo response in multiple sclerosis
Term | Description | Computation |
---|---|---|
Clustering coefficient | A fraction of a node’s neighbors that are also neighbours of each other; a measure of clustered connectivity around individual nodes | \(C = \frac{1}{n}\sum\nolimits_{i \in n} {C_{i} } = \frac{1}{n}\sum\nolimits_{i \in n} {\frac{{2t_{i} }}{{k_{i} (k_{i} - 1)}}}\) |
In the context of CT networks, it reflects uniformity of CT with respect to individual nodes | n = the total number of nodes | |
Ci = the clustering coefficient of node i | ||
ki = the degree of node i | ||
Ci = 0 for ki < 2 | ||
Normalized clustering coefficient | Ratio of the mean clustering coefficient C and normalization factor Crnad computed as the mean clustering coefficient of 10 random networks (see below) with the same number of nodes and edges as the tested input network | \(C_{norm} = \frac{C}{{C_{rand} }}\) |
Characteristic pathlength | A measure of network integration representing the number of edges typically required to connect pairs of nodes in the network | \(L = \frac{1}{n}\sum\nolimits_{i \in N} {L_{i} } = \frac{1}{n}\sum\nolimits_{i \in N} {\frac{{\mathop \sum \nolimits_{j \in N \cdot j \ne i} d_{ij}^{ - 1} }}{n - 1}}\) |
In the context of CT networks, path length represents the number of required indirect correlations surpassing the sparsity threshold | Li = the average distance between node i and all other nodes | |
dij = the distance from node i to node j | ||
Normalized pathlength | The ratio of characteristic path length L and a normalization factor Lrnad based on 10 random networks, as described above | \(L_{norm} = \frac{L}{{L_{rand} }}\) |
Small-world index | Describes a topology featuring numerous short-range connections with an admixture of few long-range connections; balances specialized and distributed processing while minimizing wiring costs. Small-world networks lie on a continuum between regular networks, in which each node has the same number of edges, and random networks, in which nodes are connected to other nodes with a random probability | \(S = \frac{{C_{norm} }}{{L_{norm} }}\) |