Table 3 Pathway analysis using overrepresentation analysis (ORA) on genes significantly-affected in both Tmem135FUN025/FUN025 versus WT eyecup RNA-Seq and GSE29801 and GSE135092 datasets*.

From: A mutation in transmembrane protein 135 impairs lipid metabolism in mouse eyecups

Description

Enrichment ratio

FDR

WP4346: Cholesterol metabolism

26.40

7.41 × 10–7

GO:0016126: Sterol biosynthetic process

37.99

1.80 × 10–3

GO:0016125: Sterol metabolic process

18.16

1.81 × 10–3

GO:0008610: Lipid biosynthetic process

7.16

1.81 × 10–3

GO:0006633: Fatty acid biosynthetic process

17.35

1.81 × 10–3

mmu01212: Fatty acid metabolism

21.95

9.41 × 10–3

  1. *FDR cut-off of 0.01 is used for analysis.