Figure 2 | Scientific Reports

Figure 2

From: Upregulation of IFNɣ-mediated chemokines dominate the immune transcriptome of muscle-invasive urothelial carcinoma

Figure 2

Consensus Matrix for two unsupervised clusters for (A) Nanostring discovery cohort and (C) TCGA cohort of MIBCs. Consensus matrices represented as heatmaps for the chosen optimal cluster number (k = 2) for Nanostring discovery and TCGA cohorts, respectively. Patient samples are both rows and columns, and consensus values range from 0 (never grouped together, indicated in white) to 1 (always clustered together, indicated in red). (B) Hierarchical clustering (Euclidean correlation) of normalized abundance levels of 730 mRNAs on the NanoString human PanCancer immune panel from Nanostring discovery cohort and (D) TCGA cohort of MIBCs.

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