Table 2 The analysis of nucleotide pair frequencies of candidate nucleotide sequences of Orchidaceae plants.

From: The specific DNA barcodes based on chloroplast genes for species identification of Orchidaceae plants

Sequence

ii

si

sv

R

Avg

1st

2nd

3rd

Avg

1st

2nd

3rd

Avg

1st

2nd

3rd

Avg

1st

2nd

3rd

matK

1268

431

423

414

49

16

15

18

43

13

15

15

1.1

1.3

1.0

1.2

rbcL

1378

462

458

458

29

10

10

9

14

4

5

5

2.1

2.6

1.9

1.0

ndhF

1234

410

419

404

38

14

12

12

34

11

10

12

1.1

1.3

1.1

0.9

ycf1

4521

1514

1509

1498

205

61

72

72

200

68

62

70

1.0

0.9

1.2

1.0

matK + rbcL

2835

953

936

946

73

19

32

22

56

15

21

21

1.3

1.3

1.6

1.1

matK + ycf1

6015

1990

2008

2017

247

94

76

77

239

82

81

75

1.0

1.2

0.9

1.0

ndhF + ycf1

5718

1905

1914

1899

189

63

61

65

187

61

61

65

1.0

1.0

1.0

1.0

  1. ii Identical Pairs, si Transitionsal Pairs, sv Transversional Pairs, R si/sv.