Figure 4 | Scientific Reports

Figure 4

From: Critical evaluation of short, long, and hybrid assembly for contextual analysis of antibiotic resistance genes in complex environmental metagenomes

Figure 4

Assembler performance in assembling the in silico spiked genome of Marinobacter hydrocarbonoclasticus ATCC 49840 into two metagenomic samples (where circles represent USA-AS and squares represent USA-Inf). (a) Misassemblies per million basepairs within contigs aligning to the M. hydrocarbonoclasticus ATCC 8 genome. (b) Ratio of contigs with misassemblies to total contigs aligning to the M. hydrocarbonoclasticus genome. Y-axis indicates sequencing coverage, reported as long by short read coverages for hybrid assemblers. Hybrid assembly coverage is labeled with the long-read coverage by short-read coverage. This figure was generated using the ggplot2(v3.3.0) package in R(v3.5.0).

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