Table 2 List of miRNAs targeting the overlapped regions of STs.

From: Genome-wide identification and functional characterization of natural antisense transcripts in Salvia miltiorrhiza

ST

MiRNA

Start

End

Aligned MiRNA Fragment

Alignmenta

Aligned ST Fragment

Inhibition

ST0003

PC-3p-131493_9

211

230

AGGU-GAAGGAGCUCAAGAA

UGCUUGAGCUUCUUCCACCU

Cleavage

ST0005

mtr-miR2673a_L-1_1ss21AT

680

700

CUCUUCCUCUUCCUCUUCCUC

AAGGAAGAGGAAGCGGAAGCU

Cleavage

ST0009

bdi-miR156e-3p_1ss21GT

1204

1225

GCUCACUUCUCUCUCUGUCAUC

UAUGAGAGAGAGAGAGAUGAGA

Cleavage

ST0010

PC-5p-1795513_1

2018

2041

UCAAGGAGGGGAAAGACAAGGCCC

AGUUACUUUUUUUCUUCUUCUUGU

Cleavage

ST0018

pab-miR951

230

251

UGUUCUUGACGUCUGGACCACG

GUCGGUGGAGACGUCAAGAAAG

Cleavage

ST0019

stu-miR156d-3p_R-1_1ss10GT

1887

1907

GCUCUCUAUUCUUCUGUCAUC

GGUGAGAGGUGGAGAGAGAGC

Cleavage

ST0025

osa-miR171b

561

581

UGAUUGAGCCGUGCCAAUAUC

CAUUUUGGCAUGGCUAGAUUC

Cleavage

  1. a:”: match; “-”: mismatch.