Table 6 OsHMA3 haplotypes of 9311, H611 and IRAT129.

From: Validating a segment on chromosome 7 of japonica for establishing low-cadmium accumulating indica rice variety

Cultivar

Subspecies

Amino acid position

HMA3 haplotype*

Functional*

80

299

380

550

614

638

678

728

736

752

775

826–878

Nipponbarea

Japonica

R

F

S

V

S

A

C

T

G

V

E

 

I

Yes

Akita 64b

Japonica

R

F

S

V

S

A

C

T

G

V

E

 

I

Yes

Dulara

Aus

R

F

S

V

S

A

C

T

C

V

E

 

IV

Yes

Fengaizhana

Indica

R

L

S

I

G

A

R

T

G

A

E

 

V

Yes

Cho-Ko-Kokub

Indica

H

L

S

V

D

V

R

T

G

A

E

Deletion

VIII

No

9311

Indica

R

L

S

I

G

A

R

T

G

A

E

 

V

Yes

H611

Indica

R

L

S

I

G

A

R

T

G

A

E

 

V

Yes

H819

Indica

R

L

S

I

G

A

R

T

G

A

E

 

V

Yes

IRAT129

Japonica

R

L

S

V

G

A

R

T

G

A

E

 

X

 
  1. aThe data was cited from Yan et al24.
  2. bThe data was cited from Miyadate et al.13.