Table 1 Overview of sequencing, assembly and analysis.

From: Differential normal skin transcriptomic response in total body irradiated mice exposed to scattered versus scanned proton beams

 

DS

PBS

Total number of bases sequenced

93,995,555,464

85,127,017,962

Reads

465,324,532

421,420,881

Remapping (mRNA + ncRNA)

74.35%

77.16%

mRNA transcripts identified

34,093

36,747

ncRNA transcripts identified

19,746

19,738

Number of coding DEGs

167

140

Number of non-coding DEGs

0

14

Number of putative interactions ncRNA-mRNA

0

49