Table 2 Specimen collection date, cluster assignment and mutations from Wuhan-Hu-1 of COVID-19 cases in South Korea whose SARS-CoV-2 whole-genome sequences were reported in this study.
From: Genomic investigation of the coronavirus disease-2019 outbreak in the Republic of Korea
Case ID | Specimen collection date | Cluster assignment | Mutations from Wuhan-Hu-1 |
|---|---|---|---|
5174* | 19-Jan-2020 | C1 | G26144T(ORF3a-G251V) |
7156* | 30-Jan-2020 | C1 | None |
1534§ | 1-Feb-2020 | C1 | None |
7834 | 5-Feb-2020 | C1 | None |
3542* | 25-Jan-2020 | C2 | T4402C, G5062T(NSP3-L781F), C8782T, T28144C (ORF8-L84S) |
5431* | 30-Jan-2020 | C2 | T4402C, G5062T(NSP3-L781F), C8782T, T28144C(ORF8-L84S) |
9273* | 30-Jan-2020 | C2 | C1779T (NSP2-S325F), T4402C, G5062T(NSP3-L781F), C8782T, C15017T(NSP12-A526V), T28144C(ORF8-L84S) |
4536* | 2-Feb-2020 | C2 | C4276T, T4402C, G5062T(NSP3-L781F), C8782T, T28144C(ORF8-L84S) |
2314§ | 4-Feb-2020 | C2 | T4402C, G5062T(NSP3-L781F), C8782T, C11572, T28144C(ORF8-L84S) |
4023§ | 5-Feb-2020 | C2 | T4402C, G5062T(NSP3-L781F), C8782T, C17474T(NSP13-T413I), T28144C(ORF8-L84S) |
6303§ | 18-Feb-2020 | C2 | T4402C, G5062T(NSP3-L781F), C8782T, T28144C(ORF8-L84S) |
6712 | 21-Feb-2020 | C2 | T4402C, G5062T(NSP3-L781F), C8782T, C21846T(S-T95I), T22117G(S-N185K), T28144C(ORF8-L84S) |
3401 | 6-Feb-2020 | C3 | T3086C(NSP3-F123L), C6255T(NSP3-A1179V), C8782T, G11083T(NSP6-L37F), G17122A(NSP13-A296T), T28144C(ORF8-L84) |
7134§ | 30-Jan-2020 | C4 | A1740C(NSP2-K312T), T8767C, C8782T, C17104T(NSP13-H290Y), G26167T(ORF3a-V259L), T28144C(ORF8-L84S) |
8423* | 30-Jan-2020 | C4 | G7675T, T8767C, C8782T, C17104T(NSP13-H290Y), C18167T(NSP14-P43L), G26167T(ORF3a-V259L), T28144C(ORF8-L84S) |
7098§ | 8-Feb-2020 | C5 | C1101T(NSP2-S99F), G3119A(NSP3-E134K), C8782T, C24034T, T26729C, G28077C(ORF8-V62L), T28144C(ORF8-L84S) |
8123 | 9-Feb-2020 | C5 | C1101T(NSP2-S99F), G3119A(NSP3-E134K), C8782T, C24034T T26729C, C26873T, G28077C(ORF8-V62L), T28144C(ORF8-L84S) |
9234 | 20-Feb-2020 | C5 | C1101T(NSP2-S99F), G3119A(NSP3-E134K), C8782T, C24034T T26729C, G28077C(ORF8-V62L), T28144C(ORF8-L84S) |
2310 | 17-Feb-2020 | C6 | G5572T(NSP3-M951I), G11083T(NSP6-L37F), C14805T, G26144T(ORF3a-G251V) |
7450 | 18-Feb-2020 | C6 | A2406G(NSP2-K534R), G5572T(NSP3-M951I), G11083T(NSP6-L37F), C14805T, G26144T(ORF3a-G251V) |
2383 | 18-Feb-2020 | C6 | G5572T(NSP3-M951I), G11083T(NSP6-L37F), C14805T, T15399C, G26144T(ORF3a-G251V) |
8923 | 18-Feb-2020 | C6 | G5572T(NSP3-M951I), G11083T(NSP6-L37F), C14805T, G26144T(ORF3a-G251V) |
2305 | 18-Feb-2020 | C6 | G5572T(NSP3-M951I), G11083T(NSP6-L37F), C14805T, G26144T(ORF3a-G251V) |
3424 | 18-Feb-2020 | C6 | G5572T(NSP3-M951I), G11083T(NSP6-L37F), C14805T, G26144T(ORF3a-G251V) |
2069 | 18-Feb-2020 | C6 | C3411T(NSP3-A231V), G5572T(NSP3-M951I), G11083T(NSP6-L37F), C13551T, C14805T, G26144T(ORF3a-G251V) |
1126 | 19-Feb-2020 | C6 | T3142C, G5572T(NSP3-M951I), G11083T(NSP6-L37F), C14805T, G26144T(ORF3a-G251V) |
7092 | 19-Feb-2020 | C6 | T921A(NSP2-L39Q), G5572T(NSP3-M951I), G11083T(NSP6-L37F), C14805T, C15216T, G26144T(ORF3a-G251V) |
4528 | 19-Feb-2020 | C6 | T693C(NSP1-F143S), G5572T(NSP3-M951I), G11083T(NSP6-L37F), C14805T, G26144T(ORF3a-G251V) |
9340 | 19-Feb-2020 | C6 | G5572T(NSP3-M951I), G11083T(NSP6-L37F), C14805T, G26144T(ORF3a-G251V) |
3495 | 19-Feb-2020 | C6 | G5572T(NSP3-M951I), G11083T(NSP6-L37F), C14805T, G26144T(ORF3a-G251V) |
5253 | 20-Feb-2020 | C6 | G5572T(NSP3-M951I), G11083T(NSP6-L37F), C14805T, G26144T(ORF3a-G251V) |
1209 | 19-Feb-2020 | C6 | G5572T(NSP3-M951I), G11083T(NSP6-L37F), C14805T, G26144T(ORF3a-G251V) |
9061 | 19-Feb-2020 | C6 | G5572T(NSP3-M951I), G11083T(NSP6-L37F), C14805T, C21575T(S-L5F), G26144T(ORF3a-G251V) |
3470 | 19-Feb-2020 | C6 | G5572T(NSP3-M951I), G11083T(NSP6-L37F), C14805T, G26144T(ORF3a-G251V) |
4587 | 19-Feb-2020 | C6 | G5572T(NSP3-M951I), C11074T, G11083T(NSP6-L37F), C12049T, C14805T, A17457R, T25219C, G26144T(ORF3a-G251V) |
1284 | 19-Feb-2020 | C6 | G5572T(NSP3-M951I), G11083T(NSP6-L37F), C14805T, G26144T(ORF3a-G251V) |
9023 | 19-Feb-2020 | C6 | G5572T(NSP3-M951I), G11083T(NSP6-L37F), C14805T, G21778A, T22928C(S-F456L), C23917T, G26144T(ORF3a-G251V) |
2301 | 19-Feb-2020 | C6 | T3142C, G5572T(NSP3-M951I), G11083T(NSP6-L37F), C14805T, G26144T(ORF3a-G251V) |
4327 | 19-Feb-2020 | C6 | G5572T(NSP3-M951I), C11074T, G11083T(NSP6-L37F), C12049T, C14805T, G26144T(ORF3a-G251V) |
5028 | 21-Feb-2020 | C6 | G5572T(NSP3-M951I), G11083T(NSP6-L37F), C14805T, T15570N C16575T, A18095G(NSP14-H19R), G20974T(NSP16-D106Y), T23395A, G26144T(ORF3a-G251V) |
7821 | 20-Feb-2020 | C6 | G5572T(NSP3-M951I), G11083T(NSP6-L37F), C14805T, G22955T(S-E465stop), G26144T(ORF3a-G251V) |
3460 | 20-Feb-2020 | C6 | G5572T(NSP3-M951I), A9889G, G11083T(NSP6-L37F), C14805T, G26144T(ORF3a-G251V) |
6314 | 20-Feb-2020 | C6 | T921A(NSP2-L39Q), G5572T(NSP3-M951I), G11083T(NSP6-L37F), C14805T, G26144T(ORF3a-G251V) |
3407 | 21-Feb-2020 | C6 | G5572T(NSP3-M951I), C6327T(NSP3-T1203I), G11083T(NSP6-L37F), C14805T G26144T(ORF3a-G251V) |
1276 | 21-Feb-2020 | C6 | G5572T(NSP3-M951I), G11083T(NSP6-L37F), C14805T, G26144T(ORF3a-G251V) |
2697 | 21-Feb-2020 | C6 | G5572T(NSP3-M951I), G11083T(NSP6-L37F), C14805T, G26144T(ORF3a-G251V) |
3058 | 21-Feb-2020 | C6 | G5572T(NSP3-M951I), G11083T(NSP6-L37F), C14805T, G26144T(ORF3a-G251V) |
2840 | 23-Feb-2020 | C6 | G5572T(NSP3-M951I), C6267T(NSP3-A1183V), G11083T(NSP6-L37F), C14805T, G26144T(ORF3a-G251V) |
3486 | 21-Feb-2020 | C6 | G5572T(NSP3-M951I), G11083T(NSP6-L37F), C14805T, C19983T, G26144T(ORF3a-G251V) |
2397 | 22-Feb-2020 | C6 | G5572T(NSP3-M951I), G11083T(NSP6-L37F), C14805T, G26144T(ORF3a-G251V) |
1037 | 20-Feb-2020 | C6 | G5572T(NSP3-M951I), G11083T(NSP6-L37F), C14805T, C19983T, G26144T(ORF3a-G251V) |
3479 | 23-Feb-2020 | C6 | G5572T(NSP3-M951I), A9889G, G11083T(NSP6-L37F), C14805T, G26144T(ORF3a-G251V) |
2058 | 22-Feb-2020 | C6 | G5572T(NSP3-M951I), G11083T(NSP6-L37F), T12520C, C14805T G26144T(ORF3a-G251V) |
5679 | 24-Feb-2020 | C6 | G5572T(NSP3-M951I), A9889G, G11083T(NSP6-L37F), C14805T, C16961T(NSP13-P242L), G26144T(ORF3a-G251V) |
7239 | 26-Feb-2020 | C6 | G5572T(NSP3-M951I), G11083T(NSP6-L37F), C14805T, G26144T(ORF3a-G251V), C28311T(N-P13L) |
2205 | 20-Feb-2020 | C7 | C1342A(NSP2-Y179stop), G11083T(NSP6-L37F), C14805T, G26144T(ORF3a-G251V), C26681T |
1297 | 20-Feb-2020 | C7 | G11083T(NSP6-L37F), C14805T, G26144T(ORF3a-G251V), C26681T |
2307 | 20-Feb-2020 | C7 | G11083T(NSP6-L37F), C14805T, G26144T(ORF3a-G251V), C26681T |
2395 | 20-Feb-2020 | C7 | G11083T(NSP6-L37F), C14805T, A23512G, C25416T, G26144T(ORF3a-G251V), C26681T |
2352 | 20-Feb-2020 | C7 | G11083T(NSP6-L37F), C14805T, G26144T(ORF3a-G251V), C26681T |
2386 | 20-Feb-2020 | C7 | G11083T(NSP6-L37F), C14805T, T21769C, G26144T(ORF3a-G251V), C26681T |
1034 | 20-Feb-2020 | C7 | G11083T(NSP6-L37F), C14805T, G26144T(ORF3a-G251V), C26681T, G27556T(ORF7a-A55S) |
2356 | 20-Feb-2020 | C7 | G11083T(NSP6-L37F), C14805T, G26144T(ORF3a-G251V), C26681T |
3980 | 20-Feb-2020 | C7 | G11083T(NSP6-L37F), C14805T, G26144T(ORF3a-G251V), C26681T |
2389 | 20-Feb-2020 | C7 | G11083T(NSP6-L37F), C14805T, G26144T(ORF3a-G251V), C26681T |
7823 | 21-Feb-2020 | C7 | C11074T, G11083T(NSP6-L37F), C14805T, G26144T(ORF3a-G251V), C26681T |
