Table 2 Results PCR screening. Bats were screened for the presence of virus nucleic acids by different PCR assays.
From: The virome of German bats: comparing virus discovery approaches
PCR assays | Assay type | Bats #/novel/size* | Assay reference | Virus reference |
|---|---|---|---|---|
Adenoviridae | ||||
Adenoviridae (Polymerase) | Pan | 79/14/203H | (67) | (31) |
Arenaviridae | ||||
Old-World | Pan | 0/0/60 | (61) | Unpublished |
Bunyaviridae | ||||
Hanta Virus Puumala | cPCR | 0/0/150 | In-house design RKI | (71) |
Hanta Virus Dobrava | cPCR | 0/0/150 | In-house design RKI | (71) |
Hanta Virus Tula | cPCR | 0/0/150 | In-house design RKI | (71) |
Hantaviruses | Pan | 0/0/180 | (64) | Unpublished |
Nairoviruses | Pan | 0/0/150 | (65) | Unpublished |
Phleboviruses | Pan | 0/0/150 | (65) | Unpublished |
Coronaviridae | ||||
Coronaviridae | Pan | 1/1/240 | (35) | Unpublished (MN851285) |
Coronaviridae | Pan | 0/0/90 | In-house design RKI | unpublished |
Flaviviridae | ||||
Flaviviridae | Pan | 0/0/150 | In-house design | Unpublished |
Flaviviridae | Pan | 0/0/180 | (63) | (71) |
Herpesviridae | ||||
BatGHV1 | cPCR | 1/1/180 | (34) | (71) |
BatGHV3 | cPCR | 7/1/180 | (34) | (71) |
BatGHV4 | cPCR | 22/1/210 | (34) | (71) |
BatGHV5 | cPCR | 11/1/210 | (34) | (71) |
BatGHV6 | cPCR | 24/1/210 | (34) | (71) |
BatGHV7 | cPCR | 2/1/210 | (34) | (71) |
BatBHV1 | cPCR | 1/1/180 | (34) | (71) |
Herpesviridae | pan | 11/9/60 | (68) | Unpublished |
Orthomyxoviridae | ||||
Influenza A | qPCR | 0/0/330 | (66) | – |
Paramyxoviridae | ||||
Res-Mor-Hen | Pan | 2/2/120 | (60) | (32) |
PAR | Pan | 3/3/180 | (60) | (32) |
Poxviridae | ||||
Low GC poxviruses | Pan | 0/0/263 | (70) | Unpublished |
