Table 1 Number of taar and tarl genes in aquatic vertebrates.
From: Olfactory function in the trace amine-associated receptor family (TAARs) evolved twice independently
Class II taar genes | ||||||
|---|---|---|---|---|---|---|
Abbr | Scientific species name | Vernacular name | tarl | taar12 | taar13 | Other |
Jawless and cartilaginous fish | ||||||
Cm | Callorhinchus milii | Elephant shark | 1 | 0 | 0 | 3 |
Le | Leucoraja erinacea | Little skate | 1 | 0 | 0 | 1 |
Lec | Lethenteron camtschaticum | Arctic lamprey | 51 | 0 | 0 | 0 |
Pm | Petromyzon marinus | Marine lamprey | 32 | 0 | 0 | 0 |
Rt | Rhincodon typus | Whale shark | 2 | 0 | 0 | 4 |
Early-derived ray-finned fish | ||||||
Lo | Lepisosteus oculatus | Spotted gar | 1 | 3 | 1 | 1 |
Earlier-derived teleosts (e.g. eels, cyprinids, salmon) | ||||||
Aa | Anguilla anguilla | European eel | 1 | 7 | 5 | 0 |
Aj | Anguilla japonica | Japanese eel | 2 | 9 | 9 | 0 |
Am | Astyanax mexicanus | Mexican cave-fish | 1 | 3 | 1 | 0 |
Ar | Anguilla rostrata | American eel | 2 | 13 | 8 | 0 |
Cc | Cyprinus carpio | Common carp | 2 | 15 | 5 | 0 |
Ch | Clupea harengus | Herring | 1 | 0 | 1 | 0 |
Dr | Danio rerio | Zebrafish | 1 | 12 | 5 | 0 |
El | Esox Lucius | Northern pike | 2 | 0 | 1 | 0 |
Ip | Ictalurus punctatus | Channel catfish | 1 | 2 | 8 | 0 |
Lw | Leuciscus waleckii | Amur ide | 1 | 1 | 2 | 0 |
Pp | Pimephales promelas | Fathead minnow | 1 | 5 | 2 | 0 |
Pyn | Pygocentrus nattereri | Red-bellied piranha | 1 | 5 | 4 | 0 |
Sa | Sinocyclocheilus anshuiensis | Anshui sõõrhuul | 2 | 4 | 5 | 0 |
Sf | Scleropages formosus | Dragonfish, Asian bonytongue | 2 | 0 | 4 | 0 |
Sg | Sinocyclocheilus grahami | Golden-line barbel | 1 | 6 | 5 | 0 |
Sr | Sinocyclocheilus rhinocerous | Ninasarv-sõõrhuul | 2 | 7 | 7 | 0 |
Ss | Salmo salar | Atlantic salmon | 3 | 0 | 3 | 0 |
Neoteleosts (e.g. cod, stickleback, fugu, mudskipper), without Ovalentaria | ||||||
Af | Anoplopoma fimbria | Sablefish | 1 | 0 | 2 | 0 |
Bp | Boleophthalmus pectinirostris | Giant blue-spotted mudskipper | 1 | 0 | 0 | 0 |
Cr | Cottus rhenanus | Rheingroppe | 1 | 0 | 0 | 0 |
Cs | Cynoglossus semilaevis | Tongue sole | 1 | 0 | 0 | 0 |
Dl | Dicentrarchus labrax | European seebass | 1 | 0 | 2 | 0 |
Ga | Gasterosteus aculeatus | Three-spined stickleback | 1 | 0 | 1 | 0 |
Gm | Gadus morhua | Atlantic cod | 2 | 0 | 3 | 0 |
Hc | Hippocampus comes | Tiger tail seahorse | 1 | 0 | 0 | 0 |
Lac | Lates calcarifer | Asian sea bass | 2 | 0 | 2 | 0 |
Lb | Labrus bergylta | Ballan wrasse | 1 | 0 | 4 | 0 |
Lc | Larimichthys crocea | Yellow croaker | 1 | 0 | 3 | 0 |
Mim | Miichthys miiuy | Mi-iuy croaker | 1 | 0 | 0 | 0 |
Moa | Monopterus albus | Asian swamp eel | 1 | 0 | 0 | 0 |
Mom | Mola mola | Ocean sunfish | 1 | 0 | 0 | 0 |
Ms | Morone saxatilis | Striped bass | 1 | 0 | 1 | 0 |
Nc | Notothenia coriiceps | Black rockcod | 0 | 0 | 0 | 0 |
Pa | Pampus argenteus | Silver pomfret | 1 | 0 | 0 | 0 |
Pem | Periophthalmus magnuspinnatus | Giant-fin mudskipper | 1 | 0 | 0 | 0 |
Po | Paralichthys olivaceus | Bastard halibut | 1 | 0 | 0 | 0 |
Ps | Periophthalmodon schlosseri | Giant mudskipper | 1 | 0 | 0 | 0 |
Py | Pseudopleuronectes yokohamae | Marbled flounder | 1 | 0 | 0 | 0 |
Sea | Sebastes aleutianus | Rougheye rockfish | 1 | 0 | 3 | 0 |
Sem | Sebastes minor | Akagaya | 1 | 0 | 2 | 0 |
Ser | Sebastes rubrivinctus | Flag rockfish | 1 | 0 | 2 | 0 |
Ses | Sebastes steindachneri | Yanaginomai | 1 | 0 | 1 | 0 |
Sh | Scartelaos histophorus | Blue mudskipper | 1 | 0 | 0 | 0 |
Sn | Sebastes nigrocinctus | Tiger rockfish | 1 | 0 | 1 | 0 |
Tf | Takifugu flavidus | Yellowbelly pufferfish | 0 | 0 | 0 | 0 |
Tn | Tetraodon nigroviridis | Spotted green pufferfish | 1 | 0 | 0 | 0 |
To | Thunnus orientalis | Pacific bluefin tuna | 2 | 0 | 0 | 0 |
Tr | Takifugu rubripes | Japanese pufferfish | 1 | 0 | 0 | 0 |
Ovalentaria (subgroup of neoteleosts, e.g. cichlids, killifish, medaka) | ||||||
Ac | Amphilophus citrinellus | Midas cichlid | 1 | 0 | 0 | 0 |
Al | Austrofundulus limnaeus | Järvikilli | 1 | 0 | 0 | 0 |
Cn | Cyprinodon nevadensis | Amargosa pupfish | 1 | 0 | 0 | 0 |
Cv | Cyprinodon variegatus | Sheepshead pupfish | 1 | 0 | 0 | 0 |
Fh | Fundulus heteroclitus | Mummichog | 1 | 0 | 0 | 0 |
Hb | Haplochromis burtoni | Burton's mouth-breeder | 1 | 0 | 0 | 0 |
Km | Kryptolebias marmoratus | Mangrove killifish | 1 | 0 | 0 | 0 |
Mc | Mchenga conophoros | Happy | 1 | 0 | 0 | 0 |
Mz | Maylandia zebra | Zebra mbuna | 1 | 0 | 0 | 0 |
Nb | Neolamprologus brichardi | Lyretail cichlid | 1 | 0 | 0 | 0 |
Nf | Nothobranchius furzeri | Turquoise killifish | 1 | 0 | 0 | 0 |
Ol | Oryzias latipes | Medaka | 1 | 0 | 0 | 0 |
On | Oreochromis niloticus | Nile tilapia | 1 | 0 | 0 | 0 |
Pf | Poecilia Formosa | Amazon molly | 1 | 0 | 0 | 0 |
Pl | Poecilia latipinna | Sailfin molly | 1 | 0 | 0 | 0 |
Pom | Poecilia Mexicana | Shortfin molly | 1 | 0 | 0 | 0 |
Pr | Poecilia reticulata | Guppy | 1 | 0 | 0 | 0 |
Pun | Pundamilia nyererei | Nyereres Viktoriabuntbarsch | 1 | 0 | 0 | 0 |
Stp | Stegastes partitus | Bicolor damselfish | 1 | 0 | 0 | 0 |
Xc | Xiphophorus couchianus | Monterrey platyfish | 1 | 0 | 0 | 0 |
Xh | Xiphophorus hellerii | Green swordtail | 0 | 0 | 0 | 0 |
Xm | Xiphophorus maculatus | Southern platyfish | 1 | 0 | 0 | 0 |
