Table 2 Variations of exon boundaries.

From: Nanopore sequencing reveals TACC2 locus complexity and diversity of isoforms transcribed from an intronic promoter

Representative boundaries

Variations

Name

Length (bp)

Symmetric

Pattern

Length change (BP)

Symmetric

rex07|Ex3-4

660

Yes

L0:R-465

− 465

Yes

rex08|Ex4

5313

Yes

L-4412:R0

− 4412

No

L-4463:R0

− 4463

No

L0:R-2445

− 2445

Yes

L0:R-2656

− 2656

No

L0:R-4536

− 4536

Yes

L0:R-5231

− 5231

No

rex09|Ex5

114

Yes

L0:R-19

− 19

No

rex11|Ex7

135

Yes

L-11:R0

− 11

No

L-47:R0

− 47

No

rex16|Ex9

1312

No

L0:R12

12

Yes

rex17|Ex9-10

36

Yes

L0:R4

4

No

rex18|Ex10

61

No

L-12:R0

− 12

Yes

rex19|Ex11

202

No

L-13:R0

− 13

No

L0:R93

93

Yes

rex21Ex13

116

No

L-3:R0

− 3

Yes

rex23|Ex15

141

Yes

L-4:R0

− 4

No

L0:R4

4

No

rex24|Ex17

144

Yes

L9:R0

9

Yes

rex25|Ex18

77

No

L0:R26

26

No

rex26|Ex19

44

No

L0:R4

4

No

  1. Patterns of variations are written as “L value 1:R value 2”, where “L” refers to the 5′-end and “R” indicates changes at the 3′-end. A positive value indicates exon extension, and a negative one indicates exon truncation. For example, L-4412:R0 indicates that the 5′-end is truncated by 4412 bp and the 3′-end is unchanged.
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