Table 1 Location and samples ID of the of the crayfish species analyzed for Aphanomyces astaci haplotypes.

From: Tracing the origin of the crayfish plague pathogen, Aphanomyces astaci, to the Southeastern United States

Location code	Collection code	Host species	State	Sample type	DNA extraction	Species ID (rRNA)	Haplotype (rnnS/rnnL)	GenBank rnnS	GenBank rnnL
1	SA908-DEAD1	Procambarus hybus	Mississippi	Clinical sample	CE19/01-1	Aphanomyces astaci	a	MW346522	MW346542
3	SA927-1	Cambarellus shufeldtii	Mississippi	Clinical sample	CE19/06-12	Aphanomyces astaci	usa6	MW346516	MW346536
	SA927-5	Cambarellus shufeldtii	Mississippi	Clinical sample	CE19/04-58	Aphanomyces astaci	d2	MW346519	MW346539
	SA927-8	Cambarellus shufeldtii	Mississippi	Clinical sample	CE19/04-57	Aphanomyces astaci	d2	MW346520	MW346540
	SA927-16	Cambarellus shufeldtii	Mississippi	Clinical sample	CE19/06-2	Aphanomyces astaci	d2	MW346513	MW346533
	SA927-18*	Cambarellus shufeldtii	Mississippi	Clinical sample	CE19/06-26	Aphanomyces astaci	d2	MW346512	MW346532
	SA927-23	Cambarellus shufeldtii	Mississippi	Clinical sample	CE19/06-3	Aphanomyces astaci	d2	MW346510	MW346530
	SA927-25	Cambarellus shufeldtii	Mississippi	Clinical sample	CE19/04-55	Aphanomyces astaci	d2	MW346521	MW346541
	SA927-27	Cambarellus shufeldtii	Mississippi	Clinical sample	CE19/04-59	Aphanomyces astaci	d2	MW346518	MW346538
	SA927-18*	Cambarellus shufeldtii	Mississippi	Culture	CE19/C-136	Aphanomyces astaci	d2	MW346494	MW346481
	SA927-18*	Cambarellus shufeldtii	Mississippi	Culture	CE19/C-135	Aphanomyces astaci	d2	MW346495	MW346482
	SA927-18*	Cambarellus shufeldtii	Mississippi	Culture	CE19/C-127	Aphanomyces astaci	d2	MW346498	MW346485
	SA927-18*	Cambarellus shufeldtii	Mississippi	Culture	CE19/C-138	Aphanomyces astaci	d2	MW346492	MW346479
	SA927-14	Cambarellus shufeldtii	Mississippi	Culture	CE19/C-140	Aphanomyces astaci	d2	MW346491	MW346478
	SA927-18*	Cambarellus shufeldtii	Mississippi	Culture	CE19/C-150	Aphanomyces astaci	d2	MW346487	MW346474
4	SA928-7	Cambarellus shufeldtii	Mississippi	Clinical sample	CE19/06-4	Aphanomyces astaci	d2	MW346509	MW346529
6	SA930-2	Cambarellus shufeldtii	Mississippi	Clinical sample	CE19/04-61	Aphanomyces astaci	d2	MW346517	MW346537
	SA930-4	Cambarellus shufeldtii	Mississippi	Clinical sample	CE19/07-03	Aphanomyces astaci	d2	MW346504	MW346524
	SA930-6	Procambarus clarkii	Mississippi	Clinical sample	CE19/06-15	Aphanomyces astaci	usa6	MW346515	MW346535
	SA930-8*	Procambarus clarkii	Mississippi	Clinical sample	CE19/07-08	Aphanomyces astaci	d2	MW346503	MW346523
	SA930-8*	Procambarus clarkii	Mississippi	Culture	CE19/C-141	Aphanomyces astaci	d2	MW346490	MW346477
	SA930-8*	Procambarus clarkii	Mississippi	Culture	CE19/C-128	Aphanomyces astaci	d2	MW346497	MW346484
	SA930-8 *	Procambarus clarkii	Mississippi	Culture	CE19/C-145	Aphanomyces astaci	d2	MW346489	MW346476
7	M306-3	Procambarus clarkii	Mississippi	Clinical sample	CE19/06-19	Aphanomyces astaci	d2	MW346514	MW346534
9	SA937-5	Faxonius tricuspis	Kentucky	Clinical sample	CE19/06-27	Aphanomyces astaci	usa1	MW346511	MW346531
11	SA946-9	Procambarus ablusus	Mississippi	Clinical sample	CE19/07-19	Aphanomyces astaci	d2	MW346508	MW346528
	SA946-23	Cambarus striatus	Mississippi	Clinical sample	CE19/07-21	Aphanomyces astaci	usa2	MW346507	MW346527
	SA946-FAX SP JUV	Faxonius sp.	Mississippi	Culture	CE19/C-137	Aphanomyces astaci	usa4	MW346493	MW346480
13	SA948-1	Procambarus acutus	Mississippi	Clinical sample	CE19/07-23	Aphanomyces astaci	a	MW346506	MW346526
13	SA948-5	Faxonius etnieri	Mississippi	Clinical sample	CE19/07-28	Aphanomyces astaci	a	MW346505	MW346525
23	SC32 MOLT 4*	Procambarus raneyi	South Carolina	Culture	CE19/C-130	Aphanomyces astaci	usa3	MW346496	MW346483
23	SC32 MOLT 5*	Procambarus raneyi	South Carolina	Culture	CE19/C-147	Aphanomyces astaci	usa5	MW346488	MW346475

North American crayfish species from each of the analyzed locations (Location code:1–30), including the corresponding collection codes, state, sample type (clinical sample/culture), DNA isolation code (CE19/), BLAST species ID, result of the mitochondrial rnnS/rnnL haplotype and GenBank references for the rnnS and rnnL regions. NA: not applicable. Each unique collection code refers to an individual crayfish. *Different pieces from the same molt.

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Table 1 Location and samples ID of the of the crayfish species analyzed for Aphanomyces astaci haplotypes.

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