Table 5 Description of tropism results obtained with the conventional rule (FPR < 10% corresponding to X4 tropic virus) and with the mean FPR value (mFv) rule (mean FPR value of the three sequences performed for each tropism determination < 10% corresponding to X4 tropic virus).
Conventional rule BL | Conventional rule T1 | Conventional rule T2 | mFv rule BL | mFv rule T1 | mFv rule T2 | Tropism changes with mFV rule | Number of changes with mFV rule | Tropism switches with conventional rule | Tropism switches with mFV rule |
---|---|---|---|---|---|---|---|---|---|
R5 | X4 | R5 | R5 | R5 | R5 | From X4 to R5 at T1 | 1 | Yes | NO |
X4 | X4 | X4 | X4 | X4 | R5 | From X4 to R5 at T2 | 1 | No | YES |
R5 | X4 | X4 | R5 | R5 | R5 | From X4 to R5 at T1 and T2 | 2 | Yes | NO |
X4 | X4 | X4 | R5 | X4 | R5 | From X4 to R5 at BL and T2 | 2 | No | YES |
X4 | X4 | X4 | R5 | R5 | X4 | From X4 to R5 at BL and T1 | 2 | No | YES |
R5 | X4 | X4 | R5 | R5 | R5 | From X4 to R5 at T1 and T2 | 2 | Yes | NO |
X4 | X4 | X4 | R5 | X4 | X4 | From X4 to R5 at BL | 1 | No | YES |
X4 | X4 | R5 | R5 | X4 | R5 | From X4 to R5 at BL | 1 | Yes | yes |
X4 | X4 | R5 | R5 | X4 | R5 | From X4 to R5 at BL | 1 | Yes | yes |
X4 | X4 | X4 | X4 | R5 | R5 | From X4 to R5 at T1 and at T2 | 2 | No | YES |
X4 | X4 | X4 | R5 | R5 | X4 | From X4 to R5 at BL and at T1 | 2 | No | YES |
X4 | X4 | R5 | R5 | R5 | R5 | From X4 to R5 at BL and at T1 | 2 | Yes | NO |
R5 | X4 | X4 | R5 | R5 | R5 | From X4 to R5 at T1 and at T2 | 2 | Yes | NO |
R5 | X4 | X4 | R5 | R5 | X4 | From X4 to R5 at T1 | 1 | Yes | yes |
X4 | X4 | X4 | R5 | X4 | X4 | From X4 to R5 at BL | 1 | No | YES |