Table 3 KEGG metabolic pathways significantly enriched in CT treatment as compared with CK.

From: De novo transcriptome assembly and comparative transcriptomic analysis provide molecular insights into low temperature stress response of Canarium album

Metabolism pathways

DEG number

Background number

p-value

DEG names

Photosynthesis—antenna proteins

18

53

3.076 × 10–5

LHCA1, LHCA2, LHCA3, LHCA4, LHCA5, LHCB1, LHCB3, LHCB4, LHCB5, LHCB6, LHCB7

Glycine, serine and threonine metabolism

35

164

5.821 × 10–5

AMT, AOC2, AOC3, betB, DLD, GCSH, GGAT, GLDC, GLYK, gbsA, gcvH, gcvP, gcvT, glyA, gpmB, HPR1, HPR2, ilvA, ltaE, lpd, pdhD, PHGDH, PSAT1, SDS, serA, serC, SHMT, tdcB, thrC, tynA, trpB, SHMT, ltaE, gcvH, GCSH

alpha-Linolenic acid metabolism

28

120

8.481 × 10–5

ACOX1, ACOX3, ACX, ADH1, AOS, DOX1, HPL, JMT, LOX2S, OPR

Photosynthesis

32

157

2.437 × 10–4

atpD, atpF, atpG, atpH, ATPF0B, ATPF1B, ATPF1D, ATPF1G, petC, petF, petH, psbC, psaD, psaE, psaF, psaH, psaK, psaL, psaN, psbP, psbQ, psbR, psbS, psbW, psbY, psb27

Carbon fixation in photosynthetic organisms

41

232

5.082 × 10–4

ALDO, FBP, GAPA, GGAT, glpX-SEBP, GOT1, GOT2, maeB, MDH2, NADP+, pckA, PGK, ppc, ppdK, PRK, prkB, rbcS, rpe, rpiA, tktA, tktB

Glutathione metabolism

34

182

6.341 × 10–4

APX, G6PD, GGT1/5, gnd, gntZ, gpX, gshA, gshB, GSS, GST, icd, IDH1, IDH2, ODC1, pepN, PGD, RRM2, spec, speE, speF, SRM, zwf

Carotenoid biosynthesis

20

84

6.664 × 10–4

ABA1, AOG, CCD8, crtB, crtL1, crtL2, crtP, crtQ, crtY, crtZ, YP707A, CYP97C1, lcyB, lcyE, LUT1, NCED, NPQ1, PDS, VDE, ZDS, ZEP

Pyruvate metabolism

43

257

1.001 × 10–3

ALDH, accA, aceF, ACSS, atoB, DLAT, DLD, fumB, fumC, GLO1, gloA, ldh, LDHD, lpd, maeB, MDH2, NADP+, pckA, PDHA, pdhC, pdhD, PK, ppc, ppdK, pyk

Circadian rhythm—plant

28

150

1.839 × 10–3

APRR1, CHS, CSNK2A, LHY, PHYA, PHYB, PRR5, PRR7, SPA1, TOC1

Nicotinate and nicotinamide metabolism

16

69

2.775 × 10–3

ENPP1/3, nadA, nadB, NADK, NAPRT1, pncB, ppnK, SDT1, URH1

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