Table 5 List of qRT-PCR primers used in the study.
Gene ID | Gene name | Primer sequence (5’–3’) | Description |
---|---|---|---|
Cluster-7340.51676 | PRR7 | ATCACAACAGCAGCCTCCT | Pseudo-response regulator 7 |
TTCCTGAGCAAAGCACTGAC | |||
Cluster-7340.66287 | LHY | AAATCTTCCCACCTCCGAG | Late elongated hypocoty |
CCCTCTTCAGAAACTTCCTTCC | |||
Cluster-7340.85283 | Lhcb3 | ACCCTCTTAGAAATGTTGCCTC | Light-harvesting chlorophyll a/B-protein |
TGTCCCATCCATAGTCACCTG | |||
Cluster-7340.42050 | DLD | TGTTGTTCTTGTCTCCGCTG | Dihydrolipoamide dehydrogenase |
CCATCCTCTTCTGCTTTGTG | |||
Cluster-7340.48264 | CDPK | CAACGGAGACTTGACATTTGAC | Calcium-dependent protein kinase |
GCTTCCAGTAACATTCGCAC | |||
Cluster-7340.41917 | MEKK | GGAATGTATGCCAGCGTTG | Mitogen-activated protein kinase kinase kinase |
CCTCTTCACAAATGGATGGTC | |||
Cluster-7340.50488 | WRKY25 | CCATCTCTCCTCCTCCTGTT | WRKY transcription factor 25 |
GGTTATCCCAGTTGAAGGTTTG | |||
Cluster-7340.38428 | WRKY29 | CAGATGTAGCAGTTCAAAGGGT | WRKY transcription factor 29 |
AGTGAGTTTCGGTGGGTAGG | |||
Cluster-7340.58469 | RIN4 | ATGGGAAGGGAAGGGTTT | RPM1-interacting protein 4 |
CATCAGGACTTTCATCGCC | |||
Cluster-7340.37043 | HSP90 | CGATGATGAAGATGATGAGCC | Heat shock protein 90 |
CCTCCTTGGTGATTTCCTCTG | |||
Cluster-7340.74583 | RPS2 | GAAATCTTATGCCAACCCTACC | Resistance to P. syringae 2 |
TCCGTCATCACATCCGTTT | |||
Cluster-7340.51547 | LOX2S | CAAGTTCAGCCAAGACCCTCT | Lipoxygenase |
CAACAGCCGTAACCTTCAAAG | |||
Cluster-7340.55174 | HPL | GAAACTCTCCGACTCAACCC | Hydroperoxide lyase |
ATACCCACAAAGCAACTCTCC | |||
Cluster-7340.50441 | AOS | GGTTTGTTGGTGGAGAAGGT | 9-allene oxide synthase |
CACTGTTTATTCCCTGCGG | |||
Cluster-7340.57514 | OPR | GGCTATCTCCCTTTGCTGAC | 12-oxo-phytodienoic acid reductase |
TTTCATTCTGGGCTCAACC | |||
Cluster-7340.40449 | JMT | CGGTTCTTTCTATGGCAGG | Jasmonate O-methyltransferase |
TGTGCTGGCGATGTAAATG | |||
Cluster-7340.58766 | psbS | TCTCTCAACTTCTGCTCAGTCC | Photosystem I subunit II |
CCATCTTCAACCTTAGGCTTAG | |||
Cluster-7340.38192 | psaD | AGTCCCAAACATCTCACCTTC | Photosystem I subunit II |
TCCAGTGCTTCCTCCAAAG | |||
Cluster-7340.46508 | petF | GCCGTTACAAGCCTCAAGTC | Protein–protein interaction of GcpE protein with ferredoxin I |
CTCAGCGTGGTCAAGAATGT | |||
Cluster-7340.50425 | HCT | TCCCAGCGTCTACTTCTATCG | Shikimate p-hydroxycinnamoyl transferase |
ATCCCTCTTCAACCTTCCG | |||
Cluster-7340.49158 | CCOMT | AACCACTACCAGCACTTGATTC | Caffeoyl-CoA O-methyltransferase |
GCAGTAACATCCCTCATCTCC | |||
Cluster-7340.49770 | POD | GAGTTGCTGCCTTCATTCTT | Peroxidase |
GCTGCTTCCACCTGAGTTT | |||
Cluster-7340.3616 | CMOT | TGTATCGCCAACTGAAATCG | 2-(4-chloro-3-methylphenyl)-2-oxoethyl thiocyanate |
GGCTACGCAAAGAGCAAGT | |||
Cluster-7340.51517 | 4CL | AAACAAGGGTGGCTACATACG | 4-coumarate–CoA ligase |
CATCTTTCATTGGGACTACTGC | |||
Cluster-7340.50851 | TCMO | ACATCCTCCTTCTCCGCAT | Trans-cinnamate 4-monooxygenase |
CCTCCTCATCTTCCTCCAAT | |||
Cluster-7340.50096 | PAL | CCCAAGAAGCCTCCAAACT | Phenylalanine ammonia-lyase |
AACACAGCCAGAACATTAGCC | |||
Cluster-7340.66106 | HK | TGCATGAGGATGACACTCC | Hexokinase |
CCAAGGAAGGAGACAAGCA | |||
Cluster-7340.18603 | FBP | AAGTTCGTCTGCTCTGCTGTT | Fructose-1,6-bisphosphatase |
GTTGCCTCTTCATCTTCTTCAG | |||
Cluster-7340.50923 | FBA | CCCATCTGCCCTTACTGTTC | Fructose-bisphosphate aldolase |
GGTTAGCCTCGGTGTTCTCT | |||
Cluster-7340.66723 | NADP-GAPDH | TTTAGCCATCCCACCGTT | NADP-glyceraldehyde-3-phosphate dehydrogenase |
GAGCCTTTCCCAGTGATACAG | |||
Cluster-7340.43174 | LDH | AATCCACCCAGTTTCAGTCC | Lactate dehydrogenase |
CGTTTAGCCTCCTCGTCACT | |||
Cluster-7340.37158 | ADH1/7 | CCTCTACACATCCCTTTGCC | Alcohol dehydrogenase |
AACGCTCTCCACAATCCCT | |||
Cluster-7340.33488 | AUX/IAA | AGGAGGACGAGGATGTTACTTT | Auxin/indole-3-acetic acid |
CTGTCAACGGAAGAGCAGTC | |||
Cluster-7340.64060 | GH3 | GCTGTTGATTCTGCCCTTTC | Gretchen hagen 3 |
GCGTTTCGGCTTAGGATTT | |||
Cluster-7340.51543 | SAUR | TGCTCTGCTAACTCCAAATCC | Small auxin-up RNA |
ACTCCCTTCTGCTCGTATCC | |||
Cluster-7340.49359 | ETR | TTGACCCTATCTTCTCGGTTG | Ethylene receptor |
CAATCCAAATGTGACCTCCC | |||
Cluster-7340.53982 | JAR1 | AATGTATTCCGCAGTTCCC | Jasmonic acid-amino synthetase 1 |
TAAGCCCACAGAGGAGATGG | |||
Cluster-7340.26872 | RNF5 | ATCCCTCCCGTTGTCTTCT | E3 ubiquitin-protein ligase |
GCGACCTGCTTGTTGATTC | |||
Cluster-7340.44794 | PRP6 | CCGTTCTGCCACCACTATT | Pre-mRNA-processing factor 6 |
CGGCTTCTTTATCATCCTCGT | |||
Cluster-7340.72327 | ARR-B | TCAACAAAGTGCTGGCGT | Type-B authentic response regulator |
CATTCTCCTGTCCATCCTCTT | |||
Cluster-7340.59249 | DELLA | TGAGCAAGAGACGAACCATAAC | DELLA protein |
GCTTCCCTAAATACACCTCGG | |||
Cluster-7340.60183 | PP2C | TTGTTCTCCCTCGGTTCAT | 2C type protein phosphatases |
TCCCATTCAAACTCACTCTGAC | |||
Cluster-7340.20010 | SnRK2 | GGCAACAATAATGGACCGT | Sucrose non-fermenting 1-related protein kinases 2 |
TGGTTCATAATCTCCCTCTGC | |||
Cluster-7340.50447 | TGA | GGTCAATCTACTGCTATCGTGG | TGA transcription factors |
CTTTCTTCCTCAATCGGCTT | |||
Cluster-7340.60183 | EBF1/2 | CATAGCCTGTGGATGTCCGT | EIN3-binding F-box protein |
AAGGGCATTGGCAAAGTTC | |||
Cluster-7340.50747 | EIN3 | GAAGAAGATGTCCCGTGCTC | Ethylene-insensitive protein 3 |
ATTATCAGATGCTCCACTCACC | |||
Cluster-7340.43403 | PR1 | GGCACTACACTCAGGTGGTTT | Pathogenesis-related protein 1 |
GCATCCAATGAAAGTTCCTCC |