Table 5 List of qRT-PCR primers used in the study.

From: De novo transcriptome assembly and comparative transcriptomic analysis provide molecular insights into low temperature stress response of Canarium album

Gene ID

Gene name

Primer sequence (5’–3’)

Description

Cluster-7340.51676

PRR7

ATCACAACAGCAGCCTCCT

Pseudo-response regulator 7

TTCCTGAGCAAAGCACTGAC

Cluster-7340.66287

LHY

AAATCTTCCCACCTCCGAG

Late elongated hypocoty

CCCTCTTCAGAAACTTCCTTCC

Cluster-7340.85283

Lhcb3

ACCCTCTTAGAAATGTTGCCTC

Light-harvesting chlorophyll a/B-protein

TGTCCCATCCATAGTCACCTG

Cluster-7340.42050

DLD

TGTTGTTCTTGTCTCCGCTG

Dihydrolipoamide dehydrogenase

CCATCCTCTTCTGCTTTGTG

Cluster-7340.48264

CDPK

CAACGGAGACTTGACATTTGAC

Calcium-dependent protein kinase

GCTTCCAGTAACATTCGCAC

Cluster-7340.41917

MEKK

GGAATGTATGCCAGCGTTG

Mitogen-activated protein kinase kinase kinase

CCTCTTCACAAATGGATGGTC

Cluster-7340.50488

WRKY25

CCATCTCTCCTCCTCCTGTT

WRKY transcription factor 25

GGTTATCCCAGTTGAAGGTTTG

Cluster-7340.38428

WRKY29

CAGATGTAGCAGTTCAAAGGGT

WRKY transcription factor 29

AGTGAGTTTCGGTGGGTAGG

Cluster-7340.58469

RIN4

ATGGGAAGGGAAGGGTTT

RPM1-interacting protein 4

CATCAGGACTTTCATCGCC

Cluster-7340.37043

HSP90

CGATGATGAAGATGATGAGCC

Heat shock protein 90

CCTCCTTGGTGATTTCCTCTG

Cluster-7340.74583

RPS2

GAAATCTTATGCCAACCCTACC

Resistance to P. syringae 2

TCCGTCATCACATCCGTTT

Cluster-7340.51547

LOX2S

CAAGTTCAGCCAAGACCCTCT

Lipoxygenase

CAACAGCCGTAACCTTCAAAG

Cluster-7340.55174

HPL

GAAACTCTCCGACTCAACCC

Hydroperoxide lyase

ATACCCACAAAGCAACTCTCC

Cluster-7340.50441

AOS

GGTTTGTTGGTGGAGAAGGT

9-allene oxide synthase

CACTGTTTATTCCCTGCGG

Cluster-7340.57514

OPR

GGCTATCTCCCTTTGCTGAC

12-oxo-phytodienoic acid reductase

TTTCATTCTGGGCTCAACC

Cluster-7340.40449

JMT

CGGTTCTTTCTATGGCAGG

Jasmonate O-methyltransferase

TGTGCTGGCGATGTAAATG

Cluster-7340.58766

psbS

TCTCTCAACTTCTGCTCAGTCC

Photosystem I subunit II

CCATCTTCAACCTTAGGCTTAG

Cluster-7340.38192

psaD

AGTCCCAAACATCTCACCTTC

Photosystem I subunit II

TCCAGTGCTTCCTCCAAAG

Cluster-7340.46508

petF

GCCGTTACAAGCCTCAAGTC

Protein–protein interaction of GcpE protein with ferredoxin I

CTCAGCGTGGTCAAGAATGT

Cluster-7340.50425

HCT

TCCCAGCGTCTACTTCTATCG

Shikimate p-hydroxycinnamoyl transferase

ATCCCTCTTCAACCTTCCG

Cluster-7340.49158

CCOMT

AACCACTACCAGCACTTGATTC

Caffeoyl-CoA O-methyltransferase

GCAGTAACATCCCTCATCTCC

Cluster-7340.49770

POD

GAGTTGCTGCCTTCATTCTT

Peroxidase

GCTGCTTCCACCTGAGTTT

Cluster-7340.3616

CMOT

TGTATCGCCAACTGAAATCG

2-(4-chloro-3-methylphenyl)-2-oxoethyl thiocyanate

GGCTACGCAAAGAGCAAGT

Cluster-7340.51517

4CL

AAACAAGGGTGGCTACATACG

4-coumarate–CoA ligase

CATCTTTCATTGGGACTACTGC

Cluster-7340.50851

TCMO

ACATCCTCCTTCTCCGCAT

Trans-cinnamate 4-monooxygenase

CCTCCTCATCTTCCTCCAAT

Cluster-7340.50096

PAL

CCCAAGAAGCCTCCAAACT

Phenylalanine ammonia-lyase

AACACAGCCAGAACATTAGCC

Cluster-7340.66106

HK

TGCATGAGGATGACACTCC

Hexokinase

CCAAGGAAGGAGACAAGCA

Cluster-7340.18603

FBP

AAGTTCGTCTGCTCTGCTGTT

Fructose-1,6-bisphosphatase

GTTGCCTCTTCATCTTCTTCAG

Cluster-7340.50923

FBA

CCCATCTGCCCTTACTGTTC

Fructose-bisphosphate aldolase

GGTTAGCCTCGGTGTTCTCT

Cluster-7340.66723

NADP-GAPDH

TTTAGCCATCCCACCGTT

NADP-glyceraldehyde-3-phosphate dehydrogenase

GAGCCTTTCCCAGTGATACAG

Cluster-7340.43174

LDH

AATCCACCCAGTTTCAGTCC

Lactate dehydrogenase

CGTTTAGCCTCCTCGTCACT

Cluster-7340.37158

ADH1/7

CCTCTACACATCCCTTTGCC

Alcohol dehydrogenase

AACGCTCTCCACAATCCCT

Cluster-7340.33488

AUX/IAA

AGGAGGACGAGGATGTTACTTT

Auxin/indole-3-acetic acid

CTGTCAACGGAAGAGCAGTC

Cluster-7340.64060

GH3

GCTGTTGATTCTGCCCTTTC

Gretchen hagen 3

GCGTTTCGGCTTAGGATTT

Cluster-7340.51543

SAUR

TGCTCTGCTAACTCCAAATCC

Small auxin-up RNA

ACTCCCTTCTGCTCGTATCC

Cluster-7340.49359

ETR

TTGACCCTATCTTCTCGGTTG

Ethylene receptor

CAATCCAAATGTGACCTCCC

Cluster-7340.53982

JAR1

AATGTATTCCGCAGTTCCC

Jasmonic acid-amino synthetase 1

TAAGCCCACAGAGGAGATGG

Cluster-7340.26872

RNF5

ATCCCTCCCGTTGTCTTCT

E3 ubiquitin-protein ligase

GCGACCTGCTTGTTGATTC

Cluster-7340.44794

PRP6

CCGTTCTGCCACCACTATT

Pre-mRNA-processing factor 6

CGGCTTCTTTATCATCCTCGT

Cluster-7340.72327

ARR-B

TCAACAAAGTGCTGGCGT

Type-B authentic response regulator

CATTCTCCTGTCCATCCTCTT

Cluster-7340.59249

DELLA

TGAGCAAGAGACGAACCATAAC

DELLA protein

GCTTCCCTAAATACACCTCGG

Cluster-7340.60183

PP2C

TTGTTCTCCCTCGGTTCAT

2C type protein phosphatases

TCCCATTCAAACTCACTCTGAC

Cluster-7340.20010

SnRK2

GGCAACAATAATGGACCGT

Sucrose non-fermenting 1-related protein kinases 2

TGGTTCATAATCTCCCTCTGC

Cluster-7340.50447

TGA

GGTCAATCTACTGCTATCGTGG

TGA transcription factors

CTTTCTTCCTCAATCGGCTT

Cluster-7340.60183

EBF1/2

CATAGCCTGTGGATGTCCGT

EIN3-binding F-box protein

AAGGGCATTGGCAAAGTTC

Cluster-7340.50747

EIN3

GAAGAAGATGTCCCGTGCTC

Ethylene-insensitive protein 3

ATTATCAGATGCTCCACTCACC

Cluster-7340.43403

PR1

GGCACTACACTCAGGTGGTTT

Pathogenesis-related protein 1

GCATCCAATGAAAGTTCCTCC