Table 5 Comparison of in vitro and in silico characteristics.
Metabolic substrate or product | AF52-21T | CM04-06T | ATCC 27768T | |||
|---|---|---|---|---|---|---|
In silico | In vitro | In silico | In vitro | In silico | In vitro | |
Cellobiose | GH2, GH3 | + | GH1, GH2, GH3, GH88 | – | GH1, GH2, GH3, GH4, GH88, GH94 | w |
Galactose | GH2 | w | GH2 | – | GH2, GH36 | – |
Glucose | GH31 | w | GH1, GH31 | – | GH1, GH31, GH33, GH43 | + |
Lactose | GH2, GH31 | + | GH1, GH2, GH31 | – | GH1, GH2, GH31, GH36, GH43 | – |
Maltose | GH13, GH13_20, GH13_39, GH77, GT35 | + | GH1, GH13, GH13_20, GH13_39, GH77, GT35 | + | GH1, GH13, GH13_20, GH13_39, GH77, GT35 | w |
Mannose | GH2, GH3 | + | GH2, GH3 | + | GH2, GH3 | – |
Raffinose | GH2, GH13, GH32 | – | GH2, GH13, GH32 | w | GH2, GH4, GH13, GH32, GH36 | – |
Trehalose | GH13 | + | GH13 | w | GH13 | w |
Glycogen | GH13, GH13_9, GH13_39, GT5, GT35 | + | GH13, GH13_9, GH13_39, GT5, GT35 | – | GH13, GH13_9, GH13_39, GT5, GT35 | – |
Inulin | GH32 | + | GH32 | – | GH32 | + |
butyric acid | butyryl-CoA:acetate CoA transferase | + | butyryl-CoA:acetate CoA transferase | + | butyryl-CoA:acetate CoA transferase | + |
