Table 1 Summary of the number of isoforms exhibiting cis and/or trans regulatory divergence between IR64 and Apo under non- and water-stress conditions. χ2 statistics (with P-values; test for 2 × 2 contingency or two independent proportions with Yates’ continuity correction) indicates the significant difference of the number of isoforms classified in each regulatory category between the two treatments.
Regulatory factors/interactions | Non-stress No. of genes (%) | Water-stress No. of genes (%) | χ2 statistics (P-value) |
|---|---|---|---|
cis | 415 (11.2) | 456 (12.6) | 3.19 (0.074) |
cis + trans (synergistic) | 75 (2.0) | 194 (5.4) | 56.45 (< 0.001) |
cis × trans (antagonistic) | 135 (3.6) | 118 (3.3) | 0.72 (0.397) |
compensatory | 187 (5.1) | 188 (5.2) | 0.05 (0.828) |
trans | 328 (8.9) | 551 (15.2) | 69.34 (< 0.001) |
Ambiguous | 696 (18.8) | 752 (20.7) | 4.315 (0.038) |
Conserved | 1869 (50.4) | 1366 (37.7) | 120.529 (< 0.001) |
Total | 3705 | 3626 |
