Table 2 Sample information and summary of haplotype/genotype distribution, genetic diversity for each population.
From: Phylogeography of Prunus armeniaca L. revealed by chloroplast DNA and nuclear ribosomal sequences
Population | cpDNA | ITS | ||||||
|---|---|---|---|---|---|---|---|---|
Haplotype composition | N | Hd | π | Genotype composition | N | Hd | π | |
DZGhcmd | H1(6), H10(1), H11(1), H12(1) | 9 | 0.583 | 0.0016 | T2(2), T9(1), T14(1), T17(2), T19(1), T20(1), T21(1), T22(1) | 10 | 0.956 | 0.0082 |
DZGhcy | H1(9) | 9 | 0.000 | 0.0000 | T3(2), T8(1), T9(3), T23(1), | 7 | 0.810 | 0.0067 |
DZGhcm | H1(7), H8(1), H9(1) | 9 | 0.417 | 0.0002 | T2(1), T3(4), T8(1), T9(1), T18(1) | 8 | 0.786 | 0.0000 |
DZGyn | H1(6), H7(1), H15(1), H16(1), H17(1) | 10 | 0.667 | 0.0011 | T1(1), T3(2), T8(2), T9(1), T14(2), T30(1) | 9 | 0.917 | 0.0087 |
DZGglb | H1(6), H5(1), H6(1), H7(2) | 10 | 0.644 | 0.0012 | T2(1), T3(3), T8(2), T13(1), T14(1), T15(1) | 9 | 0.889 | 0.0043 |
DZGgld | H1(6), H3(1) | 7 | 0.286 | 0.0010 | T3(4), T8(1), T16(1), T17(1) | 7 | 0.714 | 0.0027 |
DZGxyt | H1(8), H2(1) | 9 | 0.222 | 0.0001 | T3(4), T8(2), T9(2), T12(1), T25(1) | 10 | 0.822 | 0.0032 |
DZGxya | H1(1), H4(1), H13(1) | 3 | 1.000 | 0.0039 | T2(2), T24(1) | 3 | 0.667 | 0.0988 |
DZGxyz | H1(7), H3(1), H14(1) | 9 | 0.417 | 0.0031 | T2(2), T3(2), T26(1), T27(1),T28(1), T29(2) | 9 | 0.917 | 0.0057 |
Within population | 75 | 0.444 | 0.0013 | 72 | 0.878 | 0.0055 | ||
CAG | H1(21), H2(1), H3(1), H4(1) | 24 | 0.239 | 0.0006 | T1(5), T2(11), T3(8), T4(1), T5(1), T6(1), T7(1), T8(1), T9(1), T10(1), T11(2), T12(1) | 34 | 0.832 | 0.0053 |
NCG | H1(4), H2(1) | 5 | 0.400 | 0.0002 | T1(1), T3(5), T9(2), T48(1), T49(1), T50(2) | 12 | 0.818 | 0.0047 |
EG | H1(1), H18(1), H19(1) | 3 | 1.000 | 0.0045 | T2(1), T3(4), T42(1) | 6 | 0.600 | 0.0053 |
Within population | 32 | 0.343 | 0.0012 | 52 | 0.833 | 0.0052 | ||
Among population | 107 | 0.548 | 0.0019 | 124 | 0.865 | 0.0054 | ||
NAG | H28(1), H29(2) | 3 | 0.667 | 0.0023 | T2(1), T3(6), T8(1), T9(1), T12(1), T25(1), T44(1), T45(1), T46(1), T47(1) | 15 | 0.857 | 0.0104 |
LX | H27(1) | 1 | 0.000 | 0.0000 | T3(4), T9(1) | 5 | 0.400 | 0.0014 |
ZX | H33(1) | 1 | 0.000 | 0.0000 | T2(2), T55(1), T56(2), T57(2) | 7 | 0.857 | 0.0229 |
ECG | H20(1) | 1 | 0.000 | 0.0000 | T11(1), T31(1), T32(1), T33(1), T34(1), T35(1), T36(1), T37(1), T38(1), T39(1), T40(1), T41(1) | 12 | 1.000 | 0.017 |
ZHX | H32(1) | 1 | 0.000 | 0.0000 | T52(1), T53(1), T54(1) | 3 | 1.000 | 0.0047 |
LMX | H23(1), H24(1), H25(1), H26(1) | 4 | 1.000 | 0.0051 | T3(3), T43(1) | 4 | 0.500 | 0.0170 |
FGX | H21(2), H22(1) | 3 | 0.667 | 0.0003 | ||||
T | H30(1), H31(1) | 2 | 1.000 | 0.0005 | T51(1) | 1 | 0.000 | 0.0000 |
