Table 3 Distribution of ESBL producing E. coli isolates into phylogroups, Sequence type (ST) and sequence type complex (STc) identified in the present study (n = 30).
Farm no. | Isolate ID | Phylogroup | Sequence type (ST) | Sequence type complex (STc) |
|---|---|---|---|---|
1 | CY3 | A | 10 | 10Cplex |
CY8 | A | 398 | 398Cplex | |
2 | CY12 | A | 398 | 398Cplex |
CY15 | A | 398 | 398Cplex | |
3 | CY41 | A | 410 | 23cplex |
CY53 | B1 | 2144 | ||
4 | CY63 | B2 | 297 | |
CY66 | B1 | 2179 | ||
5 | CY74 | A | 48 | 10Cplex |
CY77 | A | 3856 | ||
6 | CY86 | B1 | 602 | 446Cplex |
CY99 | D | 1722 | ||
7 | CY113 | A | 4977 | 206Cplex |
CY114 | A | 4977 | 206Cplex | |
8 | CY126 | B1 | 192 | |
CY132 | B1 | 539 | ||
9 | CY138 | B1 | 1304 | |
CY147 | B1 | 2179 | ||
10 | CY150 | B2 | 7130 | |
CY156 | B2 | 7130 | ||
11 | CY164 | A | 202 | |
CY169 | A | 746 | 10Cplex | |
12 | CY180 | A | 202 | |
CY186 | B2 | 7130 | ||
13 | CY188 | D | 297 | |
CY192 | B1 | 4681 | 469Cplex | |
14 | CY202 | A | 48 | 10Cplex |
CY203 | B1 | - | ||
15 | CY214 | B1 | - | |
CY221 | A | 206 | 206Cplex |
