Table 1 List of dictionaries used in DES-Tcell with
From: DES-Tcell is a knowledgebase for exploring immunology-related literature
Dictionaries | Enriched unique terms in the KB | Source |
|---|---|---|
Chemicals/compounds | ||
Chemical Entities of Biological Interest (ChEBI) | 12,107 | Pre-existing in DES |
Functional annotation | ||
Biological process (GO)59 | 4439 | pre-existing in DES |
Cellular component (GO)59 | 1270 | pre-existing in DES |
Molecular function (GO)59 | 1213 | pre-existing in DES |
1079 | pre-existing in DES | |
Diseases | ||
DOID ontology (bioportal) human disease ontology64 | 4290 | pre-existing in DES |
HP ontology (bioportal) human phenotype ontology65 | 3611 | pre-existing in DES |
SIDER (drug indications and side effects)66 | 3518 | pre-existing in DES |
Drugs | ||
Drugs (DrugBank)67 | 3319 | pre-existing in DES |
Human | ||
Human genes and proteins (EntrezGene)68 | 19,654 | Pre-existing in DES |
Human long non-coding RNAs69 | 228 | Pre-existing in DES |
1530 | Pre-existing in DES | |
Mutations (tmVar)70 | 15,925 | Pre-existing in DES |
Immunology | ||
Immunology related (various) | 1913 | Newly compiled |
Anatomies | ||
Human anatomy (in-house compiled) | 2634 | Pre-existing in DES |
