Table 2 Maximum likelihood estimation (Likelihood scores for tests for selection among codons of WRKY using site models implemented in PAML is detailed in Supplementary Table S5. Parameter estimates under models of variable ω ratios among sites for Oryza WRKYs are detailed in Supplementary Table S9) of selective pressure shows 17 single copy WRKY orthologs evolving under positive selective pressure.

From: Dynamic differential evolution schemes of WRKY transcription factors in domesticated and wild rice

Group

17 positively selected WRKY genes

18 conserved WRKY genes (negative/neutral selection)

I

35, 85, 96

4, 24, 78

IIa

76

62

IIb

1, 32, 73

 

IIc

3, 16, 34, 36

17, 26, 60, 67, 72

IId

83

87

IIe

12, 13, 37, 39

2, 66

III

45

15, 18, 19, 21, 91, 95