Table 2 Maximum likelihood estimation (Likelihood scores for tests for selection among codons of WRKY using site models implemented in PAML is detailed in Supplementary Table S5. Parameter estimates under models of variable ω ratios among sites for Oryza WRKYs are detailed in Supplementary Table S9) of selective pressure shows 17 single copy WRKY orthologs evolving under positive selective pressure.
From: Dynamic differential evolution schemes of WRKY transcription factors in domesticated and wild rice
Group | 17 positively selected WRKY genes | 18 conserved WRKY genes (negative/neutral selection) |
---|---|---|
I | 35, 85, 96 | 4, 24, 78 |
IIa | 76 | 62 |
IIb | 1, 32, 73 | |
IIc | 3, 16, 34, 36 | 17, 26, 60, 67, 72 |
IId | 83 | 87 |
IIe | 12, 13, 37, 39 | 2, 66 |
III | 45 | 15, 18, 19, 21, 91, 95 |