Table 4 Comparison of the sequencing data for the two japonica cultivars sown on two sowing dates with the reference genome.
From: Transcriptome analysis of flowering regulation by sowing date in Japonica Rice (Oryza sativa L.)
Sample | Cultivar | Treatment | Clean reads | Q20 (%) | Q30 (%) | Total mapped |
|---|---|---|---|---|---|---|
Leaf | Ninggeng 4 | CK | 52,871,935 | 98.92 | 96.34 | 51,199,106 (96.84%) |
T | 53,099,148 | 98.95 | 96.44 | 51,340,507 (96.69%) | ||
Yongyou 538 | CK | 47,050,997 | 98.95 | 96.49 | 45,200,802 (96.07%) | |
T | 45,630,931 | 98.50 | 95.36 | 43,236,611 (94.75%) | ||
Panicle | Ninggeng 4 | CK | 49,277,341 | 98.84 | 96.14 | 46,713,541 (94.80%) |
T | 51,622,847 | 98.89 | 96.27 | 49,835,160 (96.54%) | ||
Yongyou 538 | CK | 47,498,167 | 98.91 | 96.35 | 44,736,859 (94.19%) | |
T | 50,557,107 | 98.92 | 96.39 | 48,051,996 (95.04%) |
