Figure 6

Circular Manhattan plots to draw common regions associated with grain yield (A), number of grains (B), spike weight (C), and plant height (D) in Iranian wheat landraces and cultivars. Inner to outer circles represents average trait and stability indices including ASV, bi, HMRPGV, MASI WAASBY, Wi, and YSI, respectively. The chromosomes are plotted at the outmost circle where thin dotted blue and red lines indicate significant level at p value < 0.001 (− log₁₀ (p) > 3) and < 0.00001 (− log₁₀ (p) > 5), respectively. Green and red dots indicate genome-wide significantly associated SNPs at p value < 0.001 and < 0.00001 probability level, respectively. Scale between ChrUn and Chr1A indicates − log₁₀ (p) values. Colored boxes outside on the top right side indicate SNP density across the genome where green to red indicates less dense to dense.