Table 3 Tests for genetic bottlenecks using BOTTLENECK.

From: Temporal analysis shows relaxed genetic erosion following improved stocking practices in a subarctic transnational brown trout population

 

IAM

TPM_70

TPM_50

TPM_20

B

0.011

0.490

0.174

0.080

C

0.007

0.334

0.161

0.047

E

0.022

0.470

0.264

0.161

E2008

0.001

0.007

0.003

0.001

E2007

0.012

0.217

0.106

0.042

E2001A

0.012

0.106

0.058

0.042

E2001B

0.000

0.004

0.001

0.000

E2001C

0.005

0.096

0.042

0.017

E2001D

0.000

0.000

0.000

0.000

E2001E

0.000

0.001

0.000

0.000

E2001F

0.008

0.334

0.161

0.072

F

0.022

0.298

0.149

0.096

G

0.007

0.088

0.025

0.012

H

0.007

0.126

0.037

0.019

I

0.003

0.012

0.007

0.004

I2007

0.004

0.052

0.015

0.009

  1. Tests were performed using the infinite-allele model and the two-phase mutation model (TPM). For the latter, different proportions of STR loci that follow the stepwise mutation model were used (i.e., 70, 50, and 20%, respectively). P-values according to a 1-way Wilcoxon rank test for heterozygote excess are given and significant values are highlighted in bold font.