Table 2 The list of the genes that significantly (z-score > 3) affected at the challenged group.

From: Indicators of the molecular pathogenesis of virulent Newcastle disease virus in chickens revealed by transcriptomic profiling of spleen

Symbol

Function of genea

LFCb

FDRc

Type(s)

HGNCd

AGT

Angiotensinogen

14.366

0.0009

Growth factor

183

CAMK2A

Calcium/calmodulin dependent protein kinase II alpha

10.169

0.0008

Kinase

815

CAMKV

CaM kinase like vesicle associated

10.958

0.0101

Kinase

79,012

ELOVL2

ELOVL fatty acid elongase 2

10.402

0.0019

Enzyme

54,898

GABRA3

Gamma-aminobutyric acid type A receptor subunit alpha3

10.432

0.0006

Ion channel

2556

GFAP

Glial fibrillary acidic protein

12.885

0.0004

Other

2670

GPM6A

Glycoprotein M6A

12.11

0.0020

Ion channel

2823

IRX1

Iroquois homeobox 1

10.723

0.0026

Transcription regulator

79,192

MMD2

Monocyte to macrophage differentiation associated 2

11.067

0.0016

Kinase

221,938

PACSIN1

Protein kinase C and casein kinase substrate in neurons 1

10.774

0.0009

Kinase

29,993

PADI3

Peptidyl arginine deiminase 3

10.267

0.0005

Enzyme

51,702

PLP1

Proteolipid protein 1

13.157

0.0003

Other

5354

SLC15A2

Solute carrier family 15 member 2

10.478

0.0022

Transporter

6565

SLC1A3

Solute carrier family 1 member 3

13.277

0.0011

Transporter

6507

SLC6A11

Solute carrier family 6 member 11

11.937

0.0014

Transporter

6538

TTLL2

Tubulin tyrosine ligase like 2

10.69

0.0016

Other

83,887

  1. aIPA software was used to obtain gene’s function from the transcript identifier.
  2. bLFC, Log twofold change.
  3. cFDR, false discovery rate.
  4. dHGNC, Human Gene Nomenclature Committee.