Figure 2
From: Reconstructing and counting genomic fragments through tagmentation-based haploid phasing
GC% of Archipelagos and the junction regions and base preference in the region at the transpososome cutting site. (a) GC distribution of Archipelago (blue) and GC distribution of the 9-base junction, at various range of GC%. (b) Base preference at 6 positions of top strand surrounding the cutting site for 9-base canonical and 8- and 10-base uncanonical cuts presented by sequence logo. The symmetry of the cutting site is marked by the two boxes. The six bases on the top strand flanking the cutting site in the direction from outside to the inside of the left monomer of the transposase are numbered as: -2,-1, Dup1, Dup2, Dup3 and Dup4, where the cut was made between -1 and Dup1. The graphs were generated by Microsoft Excel, Microsoft PowerPoint and weblogo (https://weblogo.berkeley.edu/logo.cgi).
