Table 2 Detection and analysis of gene variants in 8 MSUD families.

From: Genetic analysis by targeted next-generation sequencing and novel variation identification of maple syrup urine disease in Chinese Han population

Patient ID

Gene

Proband genotype

Prediction software analysis

Pathogenicity assessment based on ACMG guideline

Genotype 1/paternal genotype

Genotype 2/maternal genotype

SIFT

Polyphen-2

MutationTaster

Conservation

P1

BCKDHA

c.841G>C(p.Gly281Arg)a

c.841G>C(p.Gly281Arg)a

Damaging

Probably damaging

Disease causing

Conserved

PM3 + PP3 + PP4

P2

BCKDHA

c.647C>T(p.Ala216Val)

c.647C>T(p.Ala216Val)

     

P3

BCKDHB

c.508C>T(p.Arg170Cys)

c.511T>C(p.Ser171Pro)a

Damaging

Probably damaging

Disease causing

Conserved

PM3 + PP3 + PP4

P4

BCKDHB

c.547C>T(p.Arg183Trp)

c.665A>C(p.Lys222Thr)a

Damaging

Probably damaging

Disease causing

Conserved

PM3 + PM5 + PP3 + PP4

P5

BCKDHB

c.284G>C(p.Gly95Ala)a

c.853C>T(p.Arg285Ter)

Damaging

Probably damaging

Disease causing

Conserved

PM3 + PP3 + PP4

P6

BCKDHB

c.331C>T(p.Arg111Ter)

c.550delT(p.S184Pfs*46)

     

P7

BCKDHB

c.523T>C(p.Phe175Leu)

c.478-552del(p.I160Ffs*25)

     

P8

DBT

c.1291C>T(p.Arg431Ter)

c.1291C>T(p.Arg431Ter)

     
  1. aNovel variation.