Table 2 Pathway enrichment analyses of differentially expressed genes in bright yellow islands of early and late post-recovery stages compared to the corresponding dark surrounding tissues.
Group | Cellular pathway | Expression | p value | FDR | No. of DEGs |
|---|---|---|---|---|---|
'Early post-recovery stage' BYIs | Super pathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle (PWY-5464) | Up-regulated | 0.0000584 | 0.0066 | 12 |
C4 photosynthetic carbon assimilation cycle, NAD-ME type (PWY-7115) | 0.000496 | 0.028 | 8 | ||
TCA cycle II (plants and fungi) (PWY-5690) | 0.0011 | 0.0299 | 6 | ||
Photosynthetic carbon assimilation cycle, PEPCK type (PWY-7117) | 0.000886 | 0.0299 | 7 | ||
3,8- divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) (CHLOROPHYLL-SYN) | Down-regulated | 0.0048 | 0.0000292 | 7 | |
'Late post-recovery stage' BYIs | PWY-6433 hydroxylated fatty acid biosynthesis (plants) | Up-regulated | 0.0297 | 0.00028 | 6 |
PWY-7186 super pathway of scopolin and esculin biosynthesis | Down-regulated | 0.0142 | 0.000183 | 6 | |
PWY1F-467 phenylpropanoid biosynthesis, initial reaction | 0.0142 | 0.000116 | 6 |
