Table 2 List of bioinformatics tools for graphical analysis of sequencing information.

SeqCode

This article

BindDB

Livyatan et al.⁸¹

CGAT

Sims et al.⁸²

ChAsE

Younesy et al.⁸³

ChIPseeker

Yu et al.⁸⁴

ChIP-seq tools

Ambrosini et al.⁸⁵

CisGenome

Ji et al.⁸⁶

Cistrome

Liu et al.⁴⁴, Zheng et al.⁸⁷

deepTools

Ramirez et al.⁴⁷, Ramirez et al.⁸⁸

EaSeq

Lerdrup et al.⁴³

Epidaurus

Wang et al.⁸⁹

GeneProf

Halbritter et al.⁹⁰

Genomation

Akalin et al.⁹¹

HOMER

Heinz et al.⁹²

ngs.plot

Shen et al.⁴⁵

PyBedGraph

Zhang et al.⁹³

seqMINER

Ye et al.⁹⁴

Spark

Nielsen et al.⁹⁵