Table 1 Overview of the transcriptome sequencing and assembly.
Sample | Clean data (bp) | HQ Clean data (bp) | Q30 (%) | Clean reads | HQ clean reads (%) | Total reads | Mapped reads |
|---|---|---|---|---|---|---|---|
Control-1 | 11,816,952,600 | 11,490,594,791 | 95.24 | 78,779,684 | 98.49 | 74,283,466 | 57,160,868 |
Control-2 | 11,454,157,500 | 11,082,646,782 | 94.25 | 76,361,050 | 98.17 | 71,979,126 | 54,524,130 |
Control-3 | 12,472,506,900 | 12,107,959,846 | 94.02 | 83,150,046 | 98.43 | 77,841,374 | 60,324,281 |
Cold-1 | 13,223,859,000 | 12,763,322,032 | 94.11 | 88,159,060 | 97.94 | 82,243,428 | 65,109,690 |
Cold-2 | 14,408,499,900 | 14,009,146,352 | 93.39 | 96,056,666 | 98.47 | 93,090,796 | 73,822,273 |
Cold-3 | 11,203,617,000 | 10,714,718,664 | 92.06 | 74,690,780 | 97.59 | 70,994,574 | 55,550,746 |
Drought-1 | 12,659,780,700 | 12,301,990,225 | 94.04 | 84,398,538 | 98.39 | 81,167,504 | 64,323,556 |
Drought-2 | 11,057,785,800 | 10,741,036,029 | 95.12 | 73,718,572 | 98.34 | 70,856,384 | 56,616,031 |
Drought-3 | 11,323,848,900 | 11,016,930,640 | 95.27 | 75,492,326 | 98.45 | 72,247,230 | 57,734,732 |
