Table 1 Statistics of the genome assembly of the IndCh An. stephensi strain.

From: The genome trilogy of Anopheles stephensi, an urban malaria vector, reveals structure of a locus associated with adaptation to environmental heterogeneity

Assembly stage

No. of contigs

Longest Contig (Mbp)

N50 (Mbp)

L50

Assembly size (Mbp)

Average Contig Length (Kbp)

Median Contig Length (Kbp)

Canu assembly

1683

10.7

3.0

20

219.8

130.6

10.9

FALCON assembly

1250

9.7

1.8

28

231.1

184.9

21.2

Merged and polished

1010

26.5

8.5

8

225.8

223.6

19.0

HiC scaffolds

962

35.9

21.4

4

226.9

236.0

18.6

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